RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 IGFLR1Q9H665 355 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 CATSPERZQ9NTU4 200 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 KANSL3Q9P2N6 904 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 SLC12A4Q9UP95 1085 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 H3BNH8 94 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 RGS10O43665 173 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 CSDE1O75534 798 aaKnown RBP10.49□□□□□ -0.73
CLIP1-201ENST00000302528 DHFRP00374 187 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 GHRP10912 638 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 IGFALSP35858 605 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 VBP1P61758 197 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 SPIBQ01892 262 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 RIPK1Q13546 671 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 RNASE12Q5GAN4 147 aaKnown RBP10.49□□□□□ -0.73
CLIP1-201ENST00000302528 IRGCQ6NXR0 463 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 CDC42EP5Q6NZY7 148 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 C16orf59Q7L2K0 433 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 PEX5LQ8IYB4 626 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 FAM151AQ8WW52 585 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 MCCC1Q96RQ3 725 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-201ENST00000302528 CST11Q9H112 138 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 SPON1Q9HCB6 807 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 GPRC5CQ9NQ84 441 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 GPSM3Q9Y4H4 160 aa10.49□□□□□ -0.73
CLIP1-201ENST00000302528 TIMM13Q9Y5L4 95 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-201ENST00000302528 INO80Q9ULG1 1556 aaPredicted RBP10.49□□□□□ -0.73
CLIP1-201ENST00000302528 IFNGP01579 166 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 TFPIP10646 304 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 HOXB8P17481 243 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 HNF4AP41235 474 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 GCLCP48506 637 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF549Q6P9A3 640 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ARMCX6Q7L4S7 300 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 WDR49Q8IV35 697 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 LZTR1Q8N653 840 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ITPKBP27987 946 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 RPA3P35244 121 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 MCCD1P59942 119 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 GCNT7Q6ZNI0 430 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ZCCHC23Q6ZST2 131 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 OR2L5Q8NG80 312 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 PYDC1Q8WXC3 89 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF184Q99676 751 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 JMJD4Q9H9V9 463 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 UXTQ9UBK9 157 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 TBC1D3BA6NDS4 549 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 SERPINA3P01011 423 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 POMCP01189 267 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 VIL1P09327 827 aaKnown RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 NR2F6P10588 404 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 RPL3P39023 403 aaKnown RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 BUD31P41223 144 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 DET1Q7L5Y6 550 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ATG9AQ7Z3C6 839 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 PLEKHH3Q7Z736 793 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF563Q8TA94 476 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ACTRT1Q8TDG2 376 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 MIR1-1HGQ9H1L0 117 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ZC3H13Q5T200 1668 aaKnown RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 A0A0G2JLW4 131 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 AVILO75366 819 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 GCATO75600 419 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 PIGNO95427 931 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 FAM86B2P0C5J1 330 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 GZMAP12544 262 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 GRIA3P42263 894 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 RPL14P50914 215 aaKnown RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 GTF2A2P52657 109 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 MYL6P60660 151 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ADIGQ0VDE8 80 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 HSPA14Q0VDF9 509 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ACAP2Q15057 778 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 MED22Q15528 200 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 PIK3R6Q5UE93 754 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 FBXW8Q8N3Y1 598 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 AADATQ8N5Z0 425 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ZNF615Q8N8J6 731 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 SLC4A11Q8NBS3 891 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 RNF31Q96EP0 1072 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 B3GALT6Q96L58 329 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 CHCHD6Q9BRQ6 235 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 PLGRKTQ9HBL7 147 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 PCDH12Q9NPG4 1184 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 KLF15Q9UIH9 416 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 VPS4AQ9UN37 437 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 G3V2T6 193 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 CASKO14936 926 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 BTG3Q14201 252 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ATP13A4Q4VNC1 1196 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 FAM131AQ6UXB0 335 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 DEF8Q6ZN54 512 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 SPATA20Q8TB22 786 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 RASSF5Q8WWW0 418 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 NELL1Q92832 810 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 DHRS1Q96LJ7 313 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 C5orf34Q96MH7 638 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 PGLYRP2Q96PD5 576 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 ACTL7BQ9Y614 415 aa10.48□□□□□ -0.73
CLIP1-201ENST00000302528 A2ML1A8K2U0 1454 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms