RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 HYIQ5T013 277 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ANGEL2Q5VTE6 544 aaKnown RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 KLHL24Q6TFL4 600 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 USP45Q70EL2 814 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 TRPV1Q8NER1 839 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SH2D3AQ9BRG2 576 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 POLR1EQ9GZS1 481 aaKnown RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ATP6V0D1P61421 351 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PGM5Q15124 567 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 MTX3Q5HYI7 312 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 RETSATQ6NUM9 610 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ADAMTSL2Q86TH1 951 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 UNC93AQ86WB7 457 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SLC9A9Q8IVB4 645 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 MAP4K3Q8IVH8 894 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PRDM5Q9NQX1 630 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 HDAC3O15379 428 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SDC2P34741 201 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 UGT2B15P54855 530 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 LACTB2Q53H82 288 aaPredicted RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 FBXO42Q6P3S6 717 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 KCNT2Q6UVM3 1135 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ITCHQ96J02 903 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SSR3Q9UNL2 185 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ZBTB14O43829 449 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 OTCP00480 354 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CTSHP09668 335 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 TCEAL5Q5H9L2 206 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PHF10Q8WUB8 498 aaKnown RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 RERGLQ9H628 205 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 A0A0B4J269 797 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CKBP12277 381 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CAP2P40123 477 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 GRIA4P48058 902 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 AP3S2P59780 193 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 KCNJ2P63252 427 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ALG11Q2TAA5 492 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ANXA8L1Q5VT79 327 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 DUPD1Q68J44 220 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 SYT12Q8IV01 421 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 OFCC1Q8IZS5 231 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 COX4I2Q96KJ9 171 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
SF3B3-201ENST00000302516 CHCHD6Q9BRQ6 235 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 PSMD13Q9UNM6 376 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF232Q9UNY5 417 aa7.72□□□□□ -1.17
SF3B3-201ENST00000302516 KHDRBS3O75525 346 aaKnown RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 TRUB2O95900 331 aaKnown RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 UMPSP11172 480 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 PSEN1P49768 467 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 BACE1P56817 501 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 HSF2Q03933 536 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 ACSM2AQ08AH3 577 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 TCEA2Q15560 299 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 AMHR2Q16671 573 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 C5orf22Q49AR2 442 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 ACSM2BQ68CK6 577 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 PJA1Q8NG27 643 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 GRPEL2Q8TAA5 225 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 ZNF607Q96SK3 696 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 TMEM134Q9H6X4 195 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 CMTM6Q9NX76 183 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 SAMD4AQ9UPU9 718 aaKnown RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 ZSCAN5CA6NGD5 496 aaPredicted RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 TYMPP19971 482 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 ACADLP28330 430 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 MIPP30301 263 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 TMEM62Q0P6H9 643 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 CTXN3Q4LDR2 81 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 PSMA8Q8TAA3 256 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 RASSF5Q8WWW0 418 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 APBA2Q99767 749 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 DUSP9Q99956 384 aaKnown RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 GPN1Q9HCN4 374 aaPredicted RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 PRDM4Q9UKN5 801 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 AP4B1Q9Y6B7 739 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 OR1E1P30953 314 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 SCNN1BP51168 640 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 CREMQ03060 361 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 CBWD6Q4V339 395 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 CWF19L1Q69YN2 538 aaKnown RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 PHF13Q86YI8 300 aaPredicted RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 FAIM2Q9BWQ8 316 aa7.71□□□□□ -1.17
SF3B3-201ENST00000302516 IFT80Q9P2H3 777 aaPredicted RBP7.71□□□□□ -1.17
SF3B3-201ENST00000302516 RBM47A0AV96 593 aaKnown RBP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TNFRSF21O75509 655 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TUBP50607 506 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 RPL26P61254 145 aaKnown RBP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 PLIN5Q00G26 463 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 PUDPQ08623 228 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 FSCN1Q16658 493 aaKnown RBP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF621Q6ZSS3 439 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 ZNF540Q8NDQ6 660 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TEX47Q8TBZ9 253 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TEFMQ96QE5 360 aaKnown RBP7.71□□□□□ -1.18
SF3B3-201ENST00000302516 SYT15Q9BQS2 421 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 IL25Q9H293 177 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 PIF1Q9H611 641 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 TCRBV5S4A2TA0A5A2 114 aa7.71□□□□□ -1.18
SF3B3-201ENST00000302516 CBX4O00257 560 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms