RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 MID2Q9UJV3 735 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 PADI4Q9UM07 663 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 SQORQ9Y6N5 450 aa14.84□□□□□ -0.03
COL6A2-201ENST00000300527 ANKRD12Q6UB98 2062 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 H3BMQ9 156 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 TIMM44O43615 452 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 MAFO75444 373 aaPredicted RBP14.83□□□□□ -0.03
COL6A2-201ENST00000300527 ATP6V1B2P21281 511 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 GJA9P57773 515 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 RAB39AQ14964 217 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 EFCAB12Q6NXP0 572 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 XRRA1Q6P2D8 792 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 FAM35AQ86V20 835 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 LSMEM2Q8N112 164 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 RYBPQ8N488 228 aaPredicted RBP14.83□□□□□ -0.03
COL6A2-201ENST00000300527 CNTD1Q8N815 330 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 CXorf38Q8TB03 319 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 KHSRPQ92945 711 aaKnown RBP eCLIP14.83□□□□□ -0.03
COL6A2-201ENST00000300527 COG8Q96MW5 612 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 BIRC8Q96P09 236 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 DPP3Q9NY33 737 aa14.83□□□□□ -0.03
COL6A2-201ENST00000300527 MAP3K20Q9NYL2 800 aaKnown RBP14.83□□□□□ -0.03
COL6A2-201ENST00000300527 SDHDO14521 159 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 ZBTB24O43167 697 aaPredicted RBP14.83□□□□□ -0.04
COL6A2-201ENST00000300527 HSPA8P11142 646 aaKnown RBP14.83□□□□□ -0.04
COL6A2-201ENST00000300527 MLNP12872 115 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 DPYSL2Q16555 572 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 TRIM16LQ309B1 348 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 FUT11Q495W5 492 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 CCDC92Q53HC0 331 aaPredicted RBP14.83□□□□□ -0.04
COL6A2-201ENST00000300527 NANOGP8Q6NSW7 305 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 DEFB106AQ8N104 65 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 RNF139Q8WU17 664 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 VPS50Q96JG6 964 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 TCF12Q99081 682 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 FTHL17Q9BXU8 183 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 UNC93B1Q9H1C4 597 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 HIPK3Q9H422 1215 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 RPF2Q9H7B2 306 aaKnown RBP14.83□□□□□ -0.04
COL6A2-201ENST00000300527 OAZ3Q9UMX2 235 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 ACOT9Q9Y305 439 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 ACKR2O00590 384 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 NUMBP49757 651 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 DCDC5Q6ZRR9 648 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 SHCBP1Q8NEM2 672 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 CELF6Q96J87 481 aaKnown RBP14.83□□□□□ -0.04
COL6A2-201ENST00000300527 SEPHS2Q99611 448 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 MUC3BQ9H195 1237 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 ADNPQ9H2P0 1102 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 ZFYVE28Q9HCC9 887 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 DUS2Q9NX74 493 aaKnown RBP14.83□□□□□ -0.04
COL6A2-201ENST00000300527 AKT3Q9Y243 479 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 UTRNP46939 3433 aa14.83□□□□□ -0.04
COL6A2-201ENST00000300527 WNT10BO00744 389 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 INPP4BO15327 924 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 ADAM23O75077 832 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TADA2AO75478 443 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 GABBR2O75899 941 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 IQCF3P0C7M6 154 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 CHRM3P20309 590 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 SLC7A1P30825 629 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 BCAP31P51572 246 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 BMXP51813 675 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 LYSMD3Q7Z3D4 306 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 PARP8Q8N3A8 854 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TMCO5AQ8N6Q1 288 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 ZNF280CQ8ND82 737 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 DQX1Q8TE96 717 aaKnown RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 VPS45Q9NRW7 570 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TBCCD1Q9NVR7 557 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 EI24O14681 340 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 CABYRO75952 493 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 EGFRP00533 1210 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 CARTPTQ16568 116 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 USP41Q3LFD5 358 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TMEM53Q6P2H8 277 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TMEM126BQ8IUX1 230 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 SLC15A4Q8N697 577 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 PPP1R10Q96QC0 940 aaKnown RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 VTI1BQ9UEU0 232 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 CORINQ9Y5Q5 1042 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 SNX10Q9Y5X0 201 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 EEF2KO00418 725 aaKnown RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 SERPINB7O75635 380 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 JCHAINP01591 159 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 SNRPB2P08579 225 aaKnown RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 MTHFD1P11586 935 aaKnown RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 NCK1P16333 377 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 NFKB1P19838 968 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 EEF1DP29692 281 aaKnown RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TPD52P55327 224 aaPredicted RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 OXCT1P55809 520 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 HSDL1Q3SXM5 330 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 PPP1R14BQ96C90 147 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TEX13BQ9BXU2 312 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 CXCL16Q9H2A7 254 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
COL6A2-201ENST00000300527 SPON1Q9HCB6 807 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 PCDH12Q9NPG4 1184 aa14.82□□□□□ -0.04
COL6A2-201ENST00000300527 DAPK2Q9UIK4 370 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms