RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 ZYG11AQ6WRX3 759 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 KCTD8Q6ZWB6 473 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 TP53INP2Q8IXH6 220 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 NAT16Q8N8M0 369 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 RNF139Q8WU17 664 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF597Q96LX8 424 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 NAA50Q9GZZ1 169 aaKnown RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 DEFB129Q9H1M3 183 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 CYP3A43Q9HB55 503 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 GBA2Q9HCG7 927 aaPredicted RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 DHRS12A0PJE2 317 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 M0QYT0 321 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 GPR25O00155 361 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 ACKR2O00590 384 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 JCHAINP01591 159 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 PRKCGP05129 697 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 BCAP31P51572 246 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 TXNL4AP83876 142 aaKnown RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 CAPRIN1Q14444 709 aaKnown RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 PPP1R3AQ16821 1122 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 LY6KQ17RY6 165 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 UTS2BQ765I0 119 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 PTPRHQ9HD43 1115 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 SMOXQ9NWM0 555 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 MAFBQ9Y5Q3 323 aaPredicted RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 DGKBQ9Y6T7 804 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 ACOT8O14734 319 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 NRP2O60462 931 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 DLX3O60479 287 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 GMNNO75496 209 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 HSPA1AP0DMV8 641 aaKnown RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 HSPA1BP0DMV9 641 aaKnown RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 CCNA2P20248 432 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 UBA1P22314 1058 aaKnown RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 MAGEA6P43360 314 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 TUBA4AP68366 448 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 PMS2P3Q13401 168 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 STEAP4Q687X5 459 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 PSTKQ8IV42 348 aaKnown RBP11.54□□□□□ -0.56
TRUB1-201ENST00000298746 DEFB106AQ8N104 65 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 IPMKQ8NFU5 416 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 TRPC4APQ8TEL6 797 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 SLC25A23Q9BV35 468 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 DGCR6LQ9BY27 220 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 TRIM8Q9BZR9 551 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 OAZ3Q9UMX2 235 aa11.54□□□□□ -0.56
TRUB1-201ENST00000298746 NRAPQ86VF7 1730 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 KLRG2A4D1S0 409 aaPredicted RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 C9IYK1 514 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ALBP02768 609 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 COL6A2P12110 1019 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 NMBRP28336 390 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 FKBP1AP62942 108 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 MERTKQ12866 999 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 MAPK11Q15759 364 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF618Q5T7W0 954 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 OLFML1Q6UWY5 402 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ABRAXAS1Q6UWZ7 409 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 NT5DC4Q86YG4 428 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 EXOC8Q8IYI6 725 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ATXN3LQ9H3M9 355 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 LRRC4Q9HBW1 653 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 CACNA2D2Q9NY47 1150 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 MAFO75444 373 aaPredicted RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ZNF12P17014 697 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 CYP3A5P20815 502 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ALDH3B2P48448 385 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 TPI1P60174 286 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 RAB39AQ14964 217 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 DPYSL2Q16555 572 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 CLEC6AQ6EIG7 209 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 CARM1Q86X55 608 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 TICAM1Q8IUC6 712 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 DENND6AQ8IWF6 608 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 CLEC4FQ8N1N0 589 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 OR2T34Q8NGX1 318 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 OR2T3Q8NH03 318 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 DCPSQ96C86 337 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 BCO2Q9BYV7 579 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 COL24A1Q17RW2 1714 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 HACD1B0YJ81 288 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 EI24O14681 340 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 KPNA2P52292 529 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 MPP1Q00013 466 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ZBTB17Q13105 803 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 GRM1Q13255 1194 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 TGFBIQ15582 683 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 CYP2A13Q16696 494 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 TMEM53Q6P2H8 277 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 SPNS2Q8IVW8 549 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 ZC3H7AQ8IWR0 971 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 CELF6Q96J87 481 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 RPL10LQ96L21 214 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 MRPL45Q9BRJ2 306 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 C9orf16Q9BUW7 83 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 EML4Q9HC35 981 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 SUCOQ9UBS9 1254 aaKnown RBP11.53□□□□□ -0.56
TRUB1-201ENST00000298746 PCDHGA7Q9Y5G6 932 aa11.53□□□□□ -0.56
TRUB1-201ENST00000298746 FAM95CA0A1B0GW59 222 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms