RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CD86P42081 329 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 RUNX3Q13761 415 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 CCDC85BQ15834 202 aaPredicted RBP24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 SLC14A2Q15849 920 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 BBS9Q3SYG4 887 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 NAPEPLDQ6IQ20 393 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 RANBP10Q6VN20 620 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 IGDCC3Q8IVU1 814 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 YAF2Q8IY57 180 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 LRRC39Q96DD0 335 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 NSMCE3Q96MG7 304 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 HS3ST2Q9Y278 367 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 K7ERQ8 282 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 ARNTLO00327 626 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 MBTPS2O43462 519 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 SMAD6O43541 496 aaKnown RBP24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 USP12O75317 370 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 TULP3O75386 442 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 KCNA5P22460 613 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 CTSOP43234 321 aaPredicted RBP24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 DGKGP49619 791 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 SULT2A1Q06520 285 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 SMAD4Q13485 552 aaKnown RBP24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 HTR4Q13639 388 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 SLC29A2Q14542 456 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 GEN1Q17RS7 908 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 HP1BP3Q5SSJ5 553 aaPredicted RBP24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 ALS2CLQ60I27 953 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 LINC00523Q86TU6 105 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 METTL3Q86U44 580 aaKnown RBP24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 AHI1Q8N157 1196 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 OR52K1Q8NGK4 314 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 GUCD1Q96NT3 240 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 NFS1Q9Y697 457 aa24.97■■□□□ 1.59
GTF2A1-201ENST00000298173 EYSQ5T1H1 3165 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 MIA3Q5JRA6 1907 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 COL4A3Q01955 1670 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 ZNF821O75541 412 aaPredicted RBP24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 AGTP01019 485 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 ELK3P41970 407 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 WNT3AP56704 352 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 DENND5AQ6IQ26 1287 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 NUDCD1Q96RS6 583 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 TRMT61BQ9BVS5 477 aaKnown RBP24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 LRRC4CQ9HCJ2 640 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 FCF1Q9Y324 198 aaKnown RBP24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 NUMBLQ9Y6R0 609 aa24.96■■□□□ 1.59
GTF2A1-201ENST00000298173 PMPCBO75439 489 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 SLC6A11P48066 632 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 NR1H3Q13133 447 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 CCDC38Q502W7 563 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 DNAJC21Q5F1R6 531 aaKnown RBP24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 CFAP58Q5T655 872 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 MBLAC2Q68D91 279 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 ANKMY2Q8IV38 441 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 CPA6Q8N4T0 437 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 FBXO36Q8NEA4 188 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 IPMKQ8NFU5 416 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 PYROXD1Q8WU10 500 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 TBL1YQ9BQ87 522 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 ARNT2Q9HBZ2 717 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 NOD2Q9HC29 1040 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 GTSE1Q9NYZ3 720 aa24.95■■□□□ 1.58
GTF2A1-201ENST00000298173 LOC285095A0A1B0GVY8 99 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 INSIG1O15503 277 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 NUDT17P0C025 328 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 SRCP12931 536 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 GDI1P31150 447 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 SCNN1BP51168 640 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 ECT2LQ008S8 904 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 RPL10LQ96L21 214 aaKnown RBP24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 TTC25Q96NG3 672 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 APOL2Q9BQE5 337 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 KIAA1549LQ6ZVL6 1849 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 SDR42E2A6NKP2 422 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 AP3B1O00203 1094 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 SERPINF2P08697 491 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 GJA4P35212 333 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 VASPP50552 380 aaPredicted RBP24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 GPX6P59796 221 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 CDH17Q12864 832 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 RALGPS1Q5JS13 557 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 MPP5Q8N3R9 675 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 SH2D3CQ8N5H7 860 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 WFIKKN2Q8TEU8 576 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 ISG20Q96AZ6 181 aaKnown RBP24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 CHFRQ96EP1 664 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 EXOC2Q96KP1 924 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 ZIM3Q96PE6 472 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 FICDQ9BVA6 458 aa24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 PIH1D1Q9NWS0 290 aaKnown RBP24.94■■□□□ 1.58
GTF2A1-201ENST00000298173 ANKRD36A6QL64 1941 aa24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 AGPSO00116 658 aa24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 EPOP01588 193 aa24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 CSNK1DP48730 415 aa24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 NPY2RP49146 381 aa24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 STK19P49842 368 aaPredicted RBP24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 RHOAP61586 193 aa24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 MESP2Q0VG99 397 aa24.93■■□□□ 1.58
GTF2A1-201ENST00000298173 DGKKQ5KSL6 1271 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms