RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 PPHLN1Q8NEY8 458 aaKnown RBP14.46□□□□□ -0.1
C9orf3-202ENST00000297979 ADAMTS19Q8TE59 1207 aa14.46□□□□□ -0.1
C9orf3-202ENST00000297979 LRRC3Q9BY71 257 aa14.46□□□□□ -0.1
C9orf3-202ENST00000297979 TXNDC16Q9P2K2 825 aa14.46□□□□□ -0.1
C9orf3-202ENST00000297979 DENND4CQ5VZ89 1909 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 HMX2A2RU54 273 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 MMP2P08253 660 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 SYN1P17600 705 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 NMBRP28336 390 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 CCNFP41002 786 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 NEK3P51956 506 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 POU6F1Q14863 301 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 SMAD1Q15797 465 aaKnown RBP14.45□□□□□ -0.1
C9orf3-202ENST00000297979 GKAP1Q5VSY0 366 aaPredicted RBP14.45□□□□□ -0.1
C9orf3-202ENST00000297979 PTCD2Q8WV60 388 aaKnown RBP14.45□□□□□ -0.1
C9orf3-202ENST00000297979 CPNE1Q99829 537 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 POLR1EQ9GZS1 481 aaKnown RBP14.45□□□□□ -0.1
C9orf3-202ENST00000297979 MIA3Q5JRA6 1907 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 C2orf71A6NGG8 1288 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 HIDE1A8MVS5 230 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 RFPL1O75677 317 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 OXCT1P55809 520 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 PKN3Q6P5Z2 889 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 TIFABQ6ZNK6 161 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 MRPL43Q8N983 215 aaKnown RBP14.45□□□□□ -0.1
C9orf3-202ENST00000297979 ARRDC2Q8TBH0 407 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 TADA1Q96BN2 335 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 GCNAQ96QF7 691 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 SPON2Q9BUD6 331 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 MTIF3Q9H2K0 278 aaKnown RBP14.45□□□□□ -0.1
C9orf3-202ENST00000297979 ATXN3LQ9H3M9 355 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 HAUS2Q9NVX0 235 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 TBC1D30Q9Y2I9 924 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 RWDD3Q9Y3V2 267 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 PSAT1Q9Y617 370 aa14.45□□□□□ -0.1
C9orf3-202ENST00000297979 COPEO14579 308 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 KDELR3O43731 214 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 GREM1O60565 184 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 CDC25CP30307 473 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 GP5P40197 560 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 NUMBP49757 651 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 DNAJC3Q13217 504 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 Q6ZNB5 142 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 KDELC2Q7Z4H8 507 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 KCNMB4Q86W47 210 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 BBS5Q8N3I7 341 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 MAB21L3Q8N8X9 362 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 POF1BQ8WVV4 589 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 SLX1AQ9BQ83 275 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 ARNT2Q9HBZ2 717 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 MRM3Q9HC36 420 aaKnown RBP14.44□□□□□ -0.1
C9orf3-202ENST00000297979 ATP13A1Q9HD20 1204 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 TLR9Q9NR96 1032 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 C20orf96Q9NUD7 363 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-202ENST00000297979 MKS1Q9NXB0 559 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 SLC17A7Q9P2U7 560 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 GRID1Q9ULK0 1009 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 TCAF1Q9Y4C2 921 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 PCDHGA4Q9Y5G9 962 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 MYLKQ15746 1914 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 CKMP06732 381 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 ADRA1DP25100 572 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 FOXN2P32314 431 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 CHRNA4P43681 627 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 ZXDBP98169 803 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 PDK4Q16654 411 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 ARMC3Q5W041 872 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 SPPL3Q8TCT6 385 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 ASAH2Q9NR71 780 aa14.44□□□□□ -0.1
C9orf3-202ENST00000297979 UBA2Q9UBT2 640 aaPredicted RBP14.44□□□□□ -0.1
C9orf3-202ENST00000297979 LSM7Q9UK45 103 aaKnown RBP14.44□□□□□ -0.1
C9orf3-202ENST00000297979 TYW5A2RUC4 315 aaKnown RBP14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SCAMP3O14828 347 aaKnown RBP14.43□□□□□ -0.1
C9orf3-202ENST00000297979 TAC1P20366 129 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 DNAJB1P25685 340 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SLC7A9P82251 487 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 PPM1LQ5SGD2 360 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 TEDDM1Q5T9Z0 273 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 GRTP1Q5TC63 336 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 PDPK2PQ6A1A2 396 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 CXorf57Q6NSI4 855 aaKnown RBP14.43□□□□□ -0.1
C9orf3-202ENST00000297979 ARL10Q8N8L6 244 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 HJURPQ8NCD3 748 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-202ENST00000297979 ZNF778Q96MU6 729 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SEMA3CQ99985 751 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 CORO1BQ9BR76 489 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 ACE2Q9BYF1 805 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-202ENST00000297979 IQCGQ9H095 443 aaKnown RBP14.43□□□□□ -0.1
C9orf3-202ENST00000297979 FGFR1OP2Q9NVK5 253 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 ETAA1Q9NY74 926 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 SEPT3Q9UH03 358 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 TRAV19A0A0A6YYK7 116 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 A0A1W2PRU2 124 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 CCDC78A2IDD5 438 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 LINC01553A4QN01 128 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 MUSKO15146 869 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 CCL16O15467 120 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 TBL1XO60907 577 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 ITGA2BP08514 1039 aa14.43□□□□□ -0.1
C9orf3-202ENST00000297979 NEFHP12036 1026 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms