RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 CINPQ9BW66 212 aaPredicted RBP23.16■■□□□ 1.3
PTX3-201ENST00000295927 TDP1Q9NUW8 608 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 HAUS2Q9NVX0 235 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 ZNF180Q9UJW8 692 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 OR51B4Q9Y5P0 310 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 FAM169AQ9Y6X4 670 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 ZCWPW2A0A1B0GU75 182 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 SNAP91O60641 907 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 CSKP41240 450 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 ARF5P84085 180 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 POU6F1Q14863 301 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 PCID2Q5JVF3 399 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 MFSD3Q96ES6 412 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 CERS2Q96G23 380 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 KIFC1Q9BW19 673 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 ARNT2Q9HBZ2 717 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 PLK2Q9NYY3 685 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 MSRAQ9UJ68 235 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 PDE4DIPQ5VU43 2346 aa23.16■■□□□ 1.3
PTX3-201ENST00000295927 ZMPSTE24O75844 475 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 NRIP1P48552 1158 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 CYTH1Q15438 398 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 DUSP6Q16828 381 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 MPP7Q5T2T1 576 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 CCDC117Q8IWD4 279 aaPredicted RBP23.15■■□□□ 1.3
PTX3-201ENST00000295927 SLC25A41Q8N5S1 370 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 C12orf76Q8N812 135 aaPredicted RBP23.15■■□□□ 1.3
PTX3-201ENST00000295927 CDKL2Q92772 493 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 ALG14Q96F25 216 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 LMAN2LQ9H0V9 348 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 IL1RAPL1Q9NZN1 696 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 VPS28Q9UK41 221 aa23.15■■□□□ 1.3
PTX3-201ENST00000295927 RANBP2P49792 3224 aaKnown RBP23.15■■□□□ 1.3
PTX3-201ENST00000295927 ZNF197O14709 1029 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 PRAMEF12O95522 483 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 CEBPBP17676 345 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 NMBRP28336 390 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 LSP1P33241 339 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 MGAT5Q09328 741 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 MPP2Q14168 576 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 POTEHQ6S545 545 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 MARK2Q7KZI7 788 aaKnown RBP23.14■■□□□ 1.3
PTX3-201ENST00000295927 C4orf33Q8N1A6 199 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 ING5Q8WYH8 240 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 ZSWIM3Q96MP5 696 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 SMC6Q96SB8 1091 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 PIDD1Q9HB75 910 aa23.14■■□□□ 1.3
PTX3-201ENST00000295927 INTS9Q9NV88 658 aaKnown RBP23.14■■□□□ 1.3
PTX3-201ENST00000295927 CD160O95971 181 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 ERVK-10P10266 1014 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 FRG1Q14331 258 aaKnown RBP23.14■■□□□ 1.29
PTX3-201ENST00000295927 SMAD1Q15797 465 aaKnown RBP23.14■■□□□ 1.29
PTX3-201ENST00000295927 PKN3Q6P5Z2 889 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 LINGO4Q6UY18 593 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 SMG7Q92540 1137 aaKnown RBP23.14■■□□□ 1.29
PTX3-201ENST00000295927 CENPTQ96BT3 561 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 ZNF778Q96MU6 729 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 GDF15Q99988 308 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 SLC17A6Q9P2U8 582 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 CLEC4EQ9ULY5 219 aa23.14■■□□□ 1.29
PTX3-201ENST00000295927 TRANK1O15050 2925 aa23.13■■□□□ 1.29
PTX3-201ENST00000295927 MYOFQ9NZM1 2061 aa23.13■■□□□ 1.29
PTX3-201ENST00000295927 SPAG7O75391 227 aa23.13■■□□□ 1.29
PTX3-201ENST00000295927 RGRP47804 291 aa23.13■■□□□ 1.29
PTX3-201ENST00000295927 RAB30Q15771 203 aa23.13■■□□□ 1.29
PTX3-201ENST00000295927 ZNF449Q6P9G9 518 aa23.13■■□□□ 1.29
PTX3-201ENST00000295927 RASSF3Q86WH2 238 aa23.13■■□□□ 1.29
PTX3-201ENST00000295927 PPHLN1Q8NEY8 458 aaKnown RBP23.13■■□□□ 1.29
PTX3-201ENST00000295927 MRPS23Q9Y3D9 190 aaKnown RBP23.13■■□□□ 1.29
PTX3-201ENST00000295927 LOC285095A0A1B0GVY8 99 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 EPOPA6NHQ4 379 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 CYBBP04839 570 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 KRT4P19013 534 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 NAB1Q13506 487 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 SLC1A5Q15758 541 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 FYB2Q5VWT5 728 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 RNF43Q68DV7 783 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 APCDD1Q8J025 514 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 ANKRD42Q8N9B4 389 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 ITFG1Q8TB96 612 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 ATXN2LQ8WWM7 1075 aaKnown RBP23.12■■□□□ 1.29
PTX3-201ENST00000295927 EXOC2Q96KP1 924 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 VPS51Q9UID3 782 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 ZMYM5Q9UJ78 669 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 TCAF1Q9Y4C2 921 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 CCDC78A2IDD5 438 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 KRT37O76014 449 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 MT-ND3P03897 115 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 SERPINF2P08697 491 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 SNRPAP09012 282 aaKnown RBP23.12■■□□□ 1.29
PTX3-201ENST00000295927 CR2P20023 1033 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 CBX2Q14781 532 aaPredicted RBP23.12■■□□□ 1.29
PTX3-201ENST00000295927 ZNF77Q15935 545 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 LGSNQ5TDP6 509 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 TMC5Q6UXY8 1006 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 DCAF4L2Q8NA75 395 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 FIBINQ8TAL6 211 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 MGARPQ8TDB4 240 aa23.12■■□□□ 1.29
PTX3-201ENST00000295927 PTCD2Q8WV60 388 aaKnown RBP23.12■■□□□ 1.29
PTX3-201ENST00000295927 SLC28A3Q9HAS3 691 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms