RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ALDOAP04075 364 aaKnown RBP9.27□□□□□ -0.92
PDPN-201ENST00000294489 ADH1AP07327 375 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 DNAJB1P25685 340 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 ERVFC1P60507 584 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 SMAD1Q15797 465 aaKnown RBP9.27□□□□□ -0.92
PDPN-201ENST00000294489 SLC14A2Q15849 920 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 PDPK2PQ6A1A2 396 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 POTEHQ6S545 545 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 FITM2Q8N6M3 262 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 PPHLN1Q8NEY8 458 aaKnown RBP9.27□□□□□ -0.92
PDPN-201ENST00000294489 SPPL3Q8TCT6 385 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 PTCD2Q8WV60 388 aaKnown RBP9.27□□□□□ -0.92
PDPN-201ENST00000294489 LRRC37BQ96QE4 947 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 RBBP8Q99708 897 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 SLC25A51Q9H1U9 297 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 NPHS2Q9NP85 383 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 AGO1Q9UL18 857 aaKnown RBP9.27□□□□□ -0.92
PDPN-201ENST00000294489 TBC1D30Q9Y2I9 924 aa9.27□□□□□ -0.92
PDPN-201ENST00000294489 KIAA0100Q14667 2235 aaKnown RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 BIRC5O15392 142 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 TIMM44O43615 452 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 PRAMEF11O60813 436 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 PMPCBO75439 489 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 DNAJC8O75937 253 aaPredicted RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 TGDSO95455 350 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 IL1BP01584 269 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 POU2F2P09086 479 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 CLCN4P51793 760 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 CSE1LP55060 971 aaKnown RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 SLC7A9P82251 487 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 TMPRSS15P98073 1019 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 ITKQ08881 620 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 POLD3Q15054 466 aaPredicted RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 TAF12Q16514 161 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 ADGRF1Q5T601 910 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 TEDDM1Q5T9Z0 273 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 DENND5AQ6IQ26 1287 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 PKN3Q6P5Z2 889 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 KDELC1Q6UW63 502 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 CCDC91Q7Z6B0 441 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 LGI2Q8N0V4 545 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 RAB3IL1Q8TBN0 382 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 WBP2Q969T9 261 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 E2F7Q96AV8 911 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 PABPC5Q96DU9 382 aaKnown RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 IMP4Q96G21 291 aaKnown RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 MAGEH1Q9H213 219 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 ARNT2Q9HBZ2 717 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 LINC01553A4QN01 128 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 SOBPA7XYQ1 873 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 MMP2P08253 660 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 PAMP19021 973 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 OR1E1P30953 314 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 CORO1AP31146 461 aaKnown RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 SERPINB8P50452 374 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 LIMK2P53671 638 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 PDE1CQ14123 709 aaPredicted RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 DBN1Q16643 649 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 INSCQ1MX18 579 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 GALNTL6Q49A17 601 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 RABGAP1LQ5R372 815 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 ZNF783Q6ZMS7 281 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 GAREM2Q75VX8 874 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 C7orf61Q8IZ16 206 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 C10orf82Q8WW14 230 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 AGAP2Q99490 1192 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 EMILIN2Q9BXX0 1053 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 NT5MQ9NPB1 228 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 VPS45Q9NRW7 570 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 IARS2Q9NSE4 1012 aaKnown RBP9.27□□□□□ -0.93
PDPN-201ENST00000294489 SIRPGQ9P1W8 387 aa9.27□□□□□ -0.93
PDPN-201ENST00000294489 J3KR12 359 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 HGSO14964 777 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 CLDN11O75508 207 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 BPGMP07738 259 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 NMBRP28336 390 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 ZXDBP98169 803 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 OVGP1Q12889 678 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 BNIP1Q12981 228 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 POU6F1Q14863 301 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 TTC31Q49AM3 519 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 SETD3Q86TU7 594 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 PPP1R14CQ8TAE6 165 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 DDX50Q9BQ39 737 aaKnown RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 ZBED2Q9BTP6 218 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 MECRQ9BV79 373 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 ACE2Q9BYF1 805 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 MRM3Q9HC36 420 aaKnown RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 ZFP37Q9Y6Q3 630 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 NUP210Q8TEM1 1887 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 ILVBLA1L0T0 632 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 TLL1O43897 1013 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 RB1P06400 928 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 HOXD9P28356 352 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 HOXA9P31269 272 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 HADHAP40939 763 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 WNT3AP56704 352 aa9.26□□□□□ -0.93
PDPN-201ENST00000294489 MSLNQ13421 630 aaPredicted RBP9.26□□□□□ -0.93
PDPN-201ENST00000294489 CAMK1Q14012 370 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms