RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 JAG2Q9Y219 1238 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 FARP1Q9Y4F1 1045 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SNCAIPQ9Y6H5 919 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PMF1-BGLAPU3KQ54 211 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 RGSL1A5PLK6 1076 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 A8MUA0 341 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SLC16A3O15427 465 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 RFPL1O75677 317 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SGPL1O95470 568 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 TOP3BO95985 862 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 GSRP00390 522 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PRDX5P30044 214 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 MAPK4P31152 587 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 EIF2DP41214 584 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CENPAP49450 140 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 SERPINH1P50454 418 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 C1QBPQ07021 282 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CTF1Q16619 201 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 FASTKD1Q53R41 847 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ZNF773Q6PK81 442 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 IGDCC3Q8IVU1 814 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PGAM4Q8N0Y7 254 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ANKFN1Q8N957 763 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 LRRC20Q8TCA0 184 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PNPT1Q8TCS8 783 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CYGBQ8WWM9 190 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 MARVELD3Q96A59 401 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 CEP19Q96LK0 163 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 UHRF1Q96T88 793 aaPredicted RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 LRRC40Q9H9A6 602 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 WDR41Q9HAD4 459 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 ITM2CQ9NQX7 267 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 MRPL39Q9NYK5 338 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 PCDH10Q9P2E7 1040 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 WARS2Q9UGM6 360 aaKnown RBP9.33□□□□□ -0.92
PDGFC-201ENST00000274071 MAN2B2Q9Y2E5 1009 aa9.33□□□□□ -0.92
PDGFC-201ENST00000274071 GOLGB1Q14789 3259 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 SAC3D1A6NKF1 404 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 C16orf96A6NNT2 1141 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 C9IYK1 514 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 E7ENX8 843 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 TOR1AO14656 332 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 TSPAN4O14817 238 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 NOS1APO75052 506 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 XYLBO75191 536 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 TIPRLO75663 272 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 IFNB1P01574 187 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 WEE2P0C1S8 567 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 EPHX2P34913 555 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 NT5C2P49902 561 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 NDST1P52848 882 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 GHRHRQ02643 423 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 KCNA1Q09470 495 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 PLCL1Q15111 1095 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 TTC39BQ5VTQ0 682 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 MBLAC2Q68D91 279 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 PM20D1Q6GTS8 502 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 CPA6Q8N4T0 437 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 TDRD5Q8NAT2 981 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 KCTD4Q8WVF5 259 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 RCN3Q96D15 328 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ALOXE3Q9BYJ1 711 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 RAB34Q9BZG1 259 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 DNAI2Q9GZS0 605 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 DHX33Q9H6R0 707 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 NTN4Q9HB63 628 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 PCDHGC3Q9UN70 934 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 DIMT1Q9UNQ2 313 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 TNRC6CQ9HCJ0 1690 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ASTN1O14525 1302 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 BAZ2AQ9UIF9 1905 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 TBX1O43435 398 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ABCB7O75027 752 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 GOT2P00505 430 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 PLA2G4BP0C869 781 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 BMP2P12643 396 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 BTF3P20290 206 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 IMPDH1P20839 514 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 HTR1BP28222 390 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ARRB2P32121 409 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 HARS2P49590 506 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 APLP1P51693 650 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ARHGDIAP52565 204 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ACTR2P61160 394 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 AP3B2Q13367 1082 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ZNF544Q6NX49 715 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ERAP2Q6P179 960 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 LINC00523Q86TU6 105 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 CAMK1DQ8IU85 385 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 KCTD17Q8N5Z5 321 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 BIRC7Q96CA5 298 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 RNF170Q96K19 258 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 SORT1Q99523 831 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 ACO2Q99798 780 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 RHOBTB2Q9BYZ6 727 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 MCCC2Q9HCC0 563 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 UBE2TQ9NPD8 197 aaPredicted RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 NPAP1Q9NZP6 1156 aa9.32□□□□□ -0.92
PDGFC-201ENST00000274071 WBP11Q9Y2W2 641 aaKnown RBP9.32□□□□□ -0.92
PDGFC-201ENST00000274071 E7ESA3 106 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms