RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 VPS39Q96JC1 886 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 RANBP9Q96S59 729 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 NPHS2Q9NP85 383 aa16.84■□□□□ 0.29
CCDC40-201ENST00000269318 LOC285095A0A1B0GVY8 99 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 TTC24A2A3L6 582 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-201ENST00000269318 CLDN11O75508 207 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 VAPBO95292 243 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 LINC00271P0C7V0 271 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 NEFHP12036 1026 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 GABRB3P28472 473 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ELF1P32519 619 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 PPM1AP35813 382 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ABCG1P45844 678 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 OVGP1Q12889 678 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 DBN1Q16643 649 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ADGRF1Q5T601 910 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ALG1LQ6GMV1 187 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 KIAA0930Q6ICG6 404 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-201ENST00000269318 C16orf46Q6P387 395 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ZC3HC1Q86WB0 502 aaKnown RBP16.83■□□□□ 0.28
CCDC40-201ENST00000269318 NUDCD3Q8IVD9 361 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 SLC25A41Q8N5S1 370 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ACVR1CQ8NER5 493 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 OR7D4Q8NG98 312 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 PPM1EQ8WY54 764 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 E2F7Q96AV8 911 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ZFRQ96KR1 1074 aaKnown RBP16.83■□□□□ 0.28
CCDC40-201ENST00000269318 GPR22Q99680 433 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 PRKD2Q9BZL6 878 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ZNF334Q9HCZ1 680 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-201ENST00000269318 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.83■□□□□ 0.28
CCDC40-201ENST00000269318 UXTQ9UBK9 157 aaPredicted RBP16.83■□□□□ 0.28
CCDC40-201ENST00000269318 STOML2Q9UJZ1 356 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 CAPN7Q9Y6W3 813 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 ANAPC1Q9H1A4 1944 aa16.83■□□□□ 0.28
CCDC40-201ENST00000269318 GJB3O75712 270 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 F11P03951 625 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 PROCP04070 461 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 ATXN1LP0C7T5 689 aaKnown RBP16.82■□□□□ 0.28
CCDC40-201ENST00000269318 TROVE2P10155 538 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCDC40-201ENST00000269318 GMPRP36959 345 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 SERPINH1P50454 418 aaKnown RBP16.82■□□□□ 0.28
CCDC40-201ENST00000269318 EPHB3P54753 998 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 BST1Q10588 318 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 BNIP1Q12981 228 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 CHI3L2Q15782 390 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 CNGA3Q16281 694 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 CHST9Q7L1S5 443 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 OTOP2Q7RTS6 562 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 CLEC14AQ86T13 490 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 RFWD2Q8NHY2 731 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 POLR1EQ9GZS1 481 aaKnown RBP16.82■□□□□ 0.28
CCDC40-201ENST00000269318 ZBP1Q9H171 429 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 RHOJQ9H4E5 214 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 IL21Q9HBE4 155 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 CHKBQ9Y259 395 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 HEATR9A2RTY3 570 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 AHSGP02765 367 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 MPOP05164 745 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 ATG16L1Q676U5 607 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 NECAB2Q7Z6G3 386 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 MICALL1Q8N3F8 863 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 C7orf26Q96N11 449 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 SEMA3CQ99985 751 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 CAB39LQ9H9S4 337 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 TMEM216Q9P0N5 145 aa16.82■□□□□ 0.28
CCDC40-201ENST00000269318 PLXNA4Q9HCM2 1894 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 ILVBLA1L0T0 632 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 SNNO75324 88 aaPredicted RBP16.81■□□□□ 0.28
CCDC40-201ENST00000269318 DNAJC8O75937 253 aaPredicted RBP16.81■□□□□ 0.28
CCDC40-201ENST00000269318 FGF18O76093 207 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 OLFM2O95897 454 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 IRF1P10914 325 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 HADHAP40939 763 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 NUMBP49757 651 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 TMPRSS15P98073 1019 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 OCRLQ01968 901 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 ZNF235Q14590 738 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 GRM3Q14832 879 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 DLG2Q15700 870 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 SIRPB2Q5JXA9 342 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 C16orf59Q7L2K0 433 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 DENND6AQ8IWF6 608 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 SLC22A12Q96S37 553 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 MGME1Q9BQP7 344 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 TRIM55Q9BYV6 548 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 KCNK13Q9HB14 408 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 IL23AQ9NPF7 189 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 TBC1D30Q9Y2I9 924 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 ACTL7AQ9Y615 435 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 BPTFQ12830 3046 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 MIA3Q5JRA6 1907 aa16.81■□□□□ 0.28
CCDC40-201ENST00000269318 A0A096LPK6 155 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 A0A1B0GVM2 712 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 TCAF2A6NFQ2 919 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 KDELR3O43731 214 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 GREM1O60565 184 aa16.8■□□□□ 0.28
CCDC40-201ENST00000269318 PAPSS2O95340 614 aaPredicted RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 DLDP09622 509 aaKnown RBP16.8■□□□□ 0.28
CCDC40-201ENST00000269318 CTSAP10619 480 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms