RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 ITPRIPL1Q6GPH6 555 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 ZFP1Q6P2D0 407 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 LCA5Q86VQ0 697 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 UNC93AQ86WB7 457 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 CATSPER1Q8NEC5 780 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 SLC45A3Q96JT2 553 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 FSD1LQ9BXM9 530 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 NDUFA13Q9P0J0 144 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 GIMAP2Q9UG22 337 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 EGFL7Q9UHF1 273 aa12.55□□□□□ -0.4
CHMP3-201ENST00000263856 C7orf72A4D263 438 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 DENRO43583 198 aaKnown RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CABYRO75952 493 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 PGK1P00558 417 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 SBK3P0C264 359 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 NPR3P17342 541 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CCNA1P78396 465 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CDH17Q12864 832 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 FAM187BQ17R55 369 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 TBC1D25Q3MII6 688 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CNSTQ6PJW8 725 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 LPCAT2Q7L5N7 544 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 HERC6Q8IVU3 1022 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CENPLQ8N0S6 344 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 LSMEM2Q8N112 164 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 TXNDC5Q8NBS9 432 aaKnown RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 ZFP42Q96MM3 310 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 WDCPQ9H6R7 721 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 FBRSL1Q9HCM7 1045 aaKnown RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 OR12D3Q9UGF7 316 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 UBQLN1Q9UMX0 589 aaKnown RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 SMIM28A0A1B0GU29 152 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 DCLK1O15075 740 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 DAB1O75553 588 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CNMDO75829 334 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CYP2B6P20813 491 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 YWHAQP27348 245 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 GABRB3P28472 473 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 GRIA3P42263 894 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CASP2P42575 452 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 CXCR3P49682 368 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 TAS2R39P59534 338 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 PPIDQ08752 370 aaKnown RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 FBXO48Q5FWF7 155 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 GPRIN1Q7Z2K8 1008 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 SETD3Q86TU7 594 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-201ENST00000263856 ADCY4Q8NFM4 1077 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 HSFY1Q96LI6 401 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 IL22Q9GZX6 179 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 RHOJQ9H4E5 214 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 NCKIPSDQ9NZQ3 722 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 DMTF1Q9Y222 760 aa12.54□□□□□ -0.4
CHMP3-201ENST00000263856 TCAF2A6NFQ2 919 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 TRIM38O00635 465 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 STRNO43815 780 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 HOXA11P31270 313 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 DPYSQ14117 519 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 KYAT1Q16773 422 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 RBM20Q5T481 1227 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 NAPEPLDQ6IQ20 393 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 NOTUMQ6P988 496 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 CLEC14AQ86T13 490 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF786Q8N393 782 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 HEXDCQ8WVB3 486 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 NPY6RQ99463 290 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SLC29A1Q99808 456 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 GBA3Q9H227 469 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 CASS4Q9NQ75 786 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SFMBT1Q9UHJ3 866 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 TDRKHQ9Y2W6 561 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 PDLIM1O00151 329 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 UBDO15205 165 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 H2AFYO75367 372 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SUPT7LO94864 414 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 CLIC3O95833 236 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SLC5A2P31639 672 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SLC1A2P43004 574 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 CDH13P55290 713 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 RAB10P61026 200 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 DCAF4L1Q3SXM0 396 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 ZBTB49Q6ZSB9 765 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 FAM47BQ8NA70 645 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 HSPBAP1Q96EW2 488 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 ZNF560Q96MR9 790 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 GPR22Q99680 433 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 DUSP16Q9BY84 665 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SENP6Q9GZR1 1112 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 PLOD2O00469 737 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 MRASO14807 208 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 BCAS2O75934 225 aaPredicted RBP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 LRIG2O94898 1065 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 SLC25A27O95847 323 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 APOA4P06727 396 aa12.53□□□□□ -0.4
CHMP3-201ENST00000263856 HNRNPCP07910 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHMP3-201ENST00000263856 KCNA5P22460 613 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms