RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 GCNT7Q6ZNI0 430 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 PARS2Q7L3T8 475 aaKnown RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 STRADAQ7RTN6 431 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 SLFN11Q7Z7L1 901 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 SLC25A45Q8N413 288 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 OR2AP1Q8NGE2 309 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 ENOX1Q8TC92 643 aaKnown RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 GPT2Q8TD30 523 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 BTN2A2Q8WVV5 523 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 FGF11Q92914 225 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 ISG20Q96AZ6 181 aaKnown RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 IFT43Q96FT9 208 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 GDAP1L1Q96MZ0 367 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 KLHL32Q96NJ5 620 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 NAA15Q9BXJ9 866 aaKnown RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 RETREG1Q9H6L5 497 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 USP29Q9HBJ7 922 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 NCKIPSDQ9NZQ3 722 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 DAAM1Q9Y4D1 1078 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 WASF2Q9Y6W5 498 aa12.45□□□□□ -0.42
TRAF4-202ENST00000262396 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
TRAF4-202ENST00000262396 PTPRBP23467 1997 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 I6L893 689 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-202ENST00000262396 SCAMP1O15126 338 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 AP1G1O43747 822 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 BRINP1O60477 761 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 NEBLO76041 1014 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 GSRP00390 522 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 CKMT1AP12532 417 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 JUNDP17535 347 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 GKP32189 559 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 KLK7P49862 253 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 UBXN1Q04323 297 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 RTP5Q14D33 572 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 KRT31Q15323 416 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 MYLK3Q32MK0 819 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 FAXCQ5TGI0 409 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 GDPD4Q6W3E5 623 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 ABI3BPQ7Z7G0 1075 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 VPS36Q86VN1 386 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 JOSD2Q8TAC2 188 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 IFI44Q8TCB0 444 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 ARHGEF2Q92974 986 aaKnown RBP12.44□□□□□ -0.42
TRAF4-202ENST00000262396 NAF1Q96HR8 494 aaKnown RBP12.44□□□□□ -0.42
TRAF4-202ENST00000262396 APOLD1Q96LR9 279 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 GBP4Q96PP9 640 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 EPAS1Q99814 870 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 SLC13A1Q9BZW2 595 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 CATSPERBQ9H7T0 1116 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 ANO10Q9NW15 660 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 TMEM248Q9NWD8 314 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 DONSONQ9NYP3 566 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 SPASTQ9UBP0 616 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 ACTL7AQ9Y615 435 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 PLXNB3Q9ULL4 1909 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 ACACAQ13085 2346 aa12.44□□□□□ -0.42
TRAF4-202ENST00000262396 URB1O60287 2271 aaKnown RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 POM121BA6NF01 834 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 C2CD4BA6NLJ0 364 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 K7ESM1 405 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 DAPK3O43293 454 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 AQP9O43315 295 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 OPA1O60313 960 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 USP12O75317 370 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ZMPSTE24O75844 475 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 TM7SF2O76062 418 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 LRIG2O94898 1065 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 GJB6O95452 261 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 CSF2P04141 144 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 CYP1A1P04798 512 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ANXA6P08133 673 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 MYF5P13349 255 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ITPKBP27987 946 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 RBMS1P29558 406 aaKnown RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 EIF2S3P41091 472 aaKnown RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 PTPN9P43378 593 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 FMO1Q01740 532 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 CDKN3Q16667 212 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 DEFB133Q30KQ1 61 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 TMEM259Q4ZIN3 620 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 SOWAHCQ53LP3 525 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ATXN7L2Q5T6C5 722 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 TRNP1Q6NT89 227 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ZCCHC8Q6NZY4 707 aaKnown RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 FOXR1Q6PIV2 292 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 KANSL1Q7Z3B3 1105 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 PLPP6Q8IY26 295 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 LSMEM2Q8N112 164 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 SCG3Q8WXD2 468 aaKnown RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 CASKIN2Q8WXE0 1202 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 FCRL3Q96P31 734 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 UBL7Q96S82 380 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 GANQ9H2C0 597 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 FANCLQ9NW38 375 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 APOBEC3BQ9UH17 382 aaKnown RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 NOCTQ9UK39 431 aaKnown RBP12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ITM2BQ9Y287 266 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ZFYVE26Q68DK2 2539 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ADAMTS20P59510 1910 aa12.43□□□□□ -0.42
TRAF4-202ENST00000262396 ZZEF1O43149 2961 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms