RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 UBE2R2Q712K3 238 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 OTOP1Q7RTM1 612 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TDRPQ86YL5 185 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 NUDCD3Q8IVD9 361 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 P3H2Q8IVL5 708 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ST13P4Q8IZP2 240 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 TOP6BLQ8N6T0 577 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PLA2G15Q8NCC3 412 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ADCY4Q8NFM4 1077 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PLD4Q96BZ4 506 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ZNF333Q96JL9 665 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 HSFY1Q96LI6 401 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CMKLR1Q99788 373 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 AGPAT1Q99943 283 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CLSTN3Q9BQT9 956 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 SEMA4AQ9H3S1 761 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 RERGLQ9H628 205 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ANKHQ9HCJ1 492 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 POLE3Q9NRF9 147 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 RAB6BQ9NRW1 208 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TRPS1Q9UHF7 1281 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 FAM153AQ9UHL3 310 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 MKL2Q9ULH7 1088 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 SCML1Q9UN30 329 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 EFR3BQ9Y2G0 817 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CAB39Q9Y376 341 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 B4DGG1 531 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 FAM227AF5H4B4 570 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TRAFD1O14545 582 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 TPBGLP0DKB5 382 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PCSK2P16519 638 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ENDOUP21128 410 aaKnown RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 TKTP29401 623 aaKnown RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 ADSLP30566 484 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 UGT1A5P35504 534 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 NEK3P51956 506 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PRKAG1P54619 331 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CBFBQ13951 182 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 NCF4Q15080 339 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CYP51A1Q16850 503 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 RFTN2Q52LD8 501 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 ARMC4Q5T2S8 1044 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 KIAA0895LQ68EN5 471 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 FBXO42Q6P3S6 717 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 YTHDF3Q7Z739 585 aaKnown RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 DCP2Q8IU60 420 aaKnown RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 SYT12Q8IV01 421 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 UNC5BQ8IZJ1 945 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 FAM174AQ8TBP5 190 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 OVCA2Q8WZ82 227 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 FAM3CQ92520 227 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ZNF669Q96BR6 464 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 MAML3Q96JK9 1138 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 COPS8Q99627 209 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 C17orf80Q9BSJ5 609 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TMEM134Q9H6X4 195 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ELL3Q9HB65 397 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 SH3BP4Q9P0V3 963 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PCDHB10Q9UN67 800 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 SNX7Q9UNH6 387 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 KLHL20Q9Y2M5 609 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 IFT52Q9Y366 437 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 N6AMT1Q9Y5N5 214 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CEMIPQ8WUJ3 1361 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CIB4A0PJX0 185 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 AGPSO00116 658 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CCDC22O60826 627 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TRAPPC6AO75865 159 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CFHP08603 1231 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 SERPINB3P29508 390 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 NMT1P30419 496 aaKnown RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 SMIM11AP58511 58 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 LAPTM5Q13571 262 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 DUPD1Q68J44 220 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 CDC73Q6P1J9 531 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 KDM7AQ6ZMT4 941 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ZNF227Q86WZ6 799 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 GPIHBP1Q8IV16 184 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 SLC22A9Q8IVM8 553 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 GJD3Q8N144 294 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 GALNT15Q8N3T1 639 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 FSTL5Q8N475 847 aaPredicted RBP4.08□□□□□ -1.76
RNF38-201ENST00000259605 TEX29Q8N6K0 151 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 HIPK4Q8NE63 616 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 TOR1AIP2Q8NFQ8 470 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 OR5T3Q8NGG3 340 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 KCTD13Q8WZ19 329 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 RFFLQ8WZ73 363 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 LMLNQ96KR4 655 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 USP28Q96RU2 1077 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ECSITQ9BQ95 431 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 HEMGNQ9BXL5 484 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 SLC2A11Q9BYW1 496 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PRDM12Q9H4Q4 367 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 ZNF576Q9H609 170 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 RMI1Q9H9A7 625 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PDE11AQ9HCR9 933 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 RAB9BQ9NP90 201 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 PRDM8Q9NQV8 689 aa4.08□□□□□ -1.76
RNF38-201ENST00000259605 THSD1Q9NS62 852 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms