RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 HAVCR1Q96D42 359 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RBM4BQ9BQ04 359 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RBM4Q9BWF3 364 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 BCL2L14Q9BZR8 327 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 MCUBQ9NWR8 336 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CKLFQ9UBR5 152 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PHF11Q9UIL8 331 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ZMYM5Q9UJ78 669 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CRYL1Q9Y2S2 319 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GMPPBQ9Y5P6 360 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RIC1Q4ADV7 1423 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ATAD5Q96QE3 1844 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RP1L1Q8IWN7 2480 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CBX4O00257 560 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 B3GAT3O94766 335 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PRG2P13727 222 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 FGFR2P21802 821 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RPL9P32969 192 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 DRG2P55039 364 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SLC6A3Q01959 620 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TRAP1Q12931 704 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 DDI2Q5TDH0 399 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TXNDC11Q6PKC3 985 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 FAM92BQ6ZTR7 304 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF655Q8N720 491 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SLC5A5Q92911 643 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 NACC2Q96BF6 587 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GALNT8Q9NY28 637 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GMIPQ9P107 970 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 DOCK2Q92608 1830 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GSAPA4D1B5 854 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 C2CD2LO14523 706 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ADCY6O43306 1168 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 IGSF6O95976 241 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 MYCP01106 439 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GLRA2P23416 452 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CXCR2P25025 360 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GSSP48637 474 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 UGT2B15P54855 530 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ORC1Q13415 861 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ACOX1Q15067 660 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CCDC157Q569K6 752 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PIK3C3Q8NEB9 887 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ETNPPLQ8TBG4 499 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 MAGEE2Q8TD90 523 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ART4Q93070 314 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 FAM136AQ96C01 138 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 COX4I2Q96KJ9 171 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RIOX1Q9H6W3 641 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GGA3Q9NZ52 723 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 HACL1Q9UJ83 578 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SSR3Q9UNL2 185 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CHD5Q8TDI0 1954 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 A0A0B4J269 797 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 NUDT17P0C025 328 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RARAP10276 462 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 GRIA4P48058 902 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SCNN1BP51168 640 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 OAZ1P54368 228 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 AMPD2Q01433 879 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 FAAP100Q0VG06 881 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 UBAP2LQ14157 1087 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PARP6Q2NL67 630 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 LRRC38Q5VT99 294 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 AFTPHQ6ULP2 937 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RP9Q8TA86 221 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 METTL6Q8TCB7 284 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 KAT2BQ92831 832 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PPP3R2Q96LZ3 170 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 NEK6Q9HC98 313 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ETNK2Q9NVF9 386 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 RBM22Q9NW64 420 aaKnown RBP eCLIP4.85□□□□□ -1.637e-6■■■■□ 24.6
RC3H1-201ENST00000258349 DNAJC5BQ9UF47 199 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 IRAK3Q9Y616 596 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 AP3D1O14617 1153 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 HAT1O14929 419 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 VAPBO95292 243 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TRUB2O95900 331 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ITGB6P18564 788 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SDC2P34741 201 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TUBA4AP68366 448 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SMCO1Q147U7 214 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CBWD6Q4V339 395 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 AGMOQ6ZNB7 445 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 DSG4Q86SJ6 1040 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF557Q8N988 423 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TRPV3Q8NET8 790 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 PSMA8Q8TAA3 256 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ZHX1-C8orf76Q96EF9 292 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ITCHQ96J02 903 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 TSPAN18Q96SJ8 248 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF607Q96SK3 696 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 KLK14Q9P0G3 267 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 CIDEBQ9UHD4 219 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 DMGDHQ9UI17 866 aaKnown RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ZNF214Q9UL59 606 aaPredicted RBP4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SNX7Q9UNH6 387 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 AXIN2Q9Y2T1 843 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 ARAP2Q8WZ64 1704 aa4.85□□□□□ -1.63
RC3H1-201ENST00000258349 SCN4AP35499 1836 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms