RNA–Protein interactions for RNA: ENST00000253024.9

TRIM28-201, Transcript of tripartite motif containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM28, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-201ENST00000253024 STRNO43815 780 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 PAGE1O75459 146 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 RPL34P49207 117 aaKnown RBP21.58■■□□□ 1.04
TRIM28-201ENST00000253024 GRB14Q14449 540 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 INSCQ1MX18 579 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 LIPMQ5VYY2 423 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 ITPRIPL1Q6GPH6 555 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 PIM3Q86V86 326 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 TMEM151AQ8N4L1 468 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 KYQ8NBH2 561 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 ICA1LQ8NDH6 482 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 FBRSL1Q9HCM7 1045 aaKnown RBP21.58■■□□□ 1.04
TRIM28-201ENST00000253024 GTF2IRD1Q9UHL9 959 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 CDYLQ9Y232 598 aa21.58■■□□□ 1.04
TRIM28-201ENST00000253024 SOAT2O75908 522 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 GPR15P49685 360 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 MTTPP55157 894 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 SEMA3BQ13214 749 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 PDK3Q15120 406 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 CYS1Q717R9 158 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 CLEC14AQ86T13 490 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 AGO3Q9H9G7 860 aaKnown RBP21.57■■□□□ 1.04
TRIM28-201ENST00000253024 WDR41Q9HAD4 459 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 PLXNA1Q9UIW2 1896 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 SPATA31D3P0C874 917 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 STMN1P16949 149 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 ARNTP27540 789 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 GRIK1P39086 918 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 TLR1Q15399 786 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 NAPEPLDQ6IQ20 393 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 SPATA31D4Q6ZUB0 917 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 ACAD11Q709F0 780 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 CASP10Q92851 521 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 FCRL2Q96LA5 508 aaPredicted RBP21.57■■□□□ 1.04
TRIM28-201ENST00000253024 NT5MQ9NPB1 228 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 COPG1Q9Y678 874 aaKnown RBP21.57■■□□□ 1.04
TRIM28-201ENST00000253024 TBX18O95935 607 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 MPOP05164 745 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 PMLP29590 882 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 GALNT2Q10471 571 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 GNASQ5JWF2 1037 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 TSTD2Q5T7W7 516 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 BNC2Q6ZN30 1099 aaPredicted RBP21.57■■□□□ 1.04
TRIM28-201ENST00000253024 OR10T2Q8NGX3 314 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 FAM110BQ8TC76 370 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 C1QTNF1Q9BXJ1 281 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 GPAMQ9HCL2 828 aa21.57■■□□□ 1.04
TRIM28-201ENST00000253024 GABRDO14764 452 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 YWHAQP27348 245 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 ARPP19P56211 112 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 GEN1Q17RS7 908 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 BHLHA9Q7RTU4 235 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 NAT14Q8WUY8 206 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 HDAC11Q96DB2 347 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 LRGUKQ96M69 825 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 TRPC7Q9HCX4 862 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 RAP2CQ9Y3L5 183 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 MBLAC1A4D2B0 266 aaPredicted RBP21.56■■□□□ 1.04
TRIM28-201ENST00000253024 PPP6CO00743 305 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 DDHD2O94830 711 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 GLDCP23378 1020 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 CNPY1Q3B7I2 92 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 LDLRAD1Q5T700 205 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 LILRA2Q8N149 483 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 IFT43Q96FT9 208 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 DCUN1D1Q96GG9 259 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 DNAJC1Q96KC8 554 aaKnown RBP21.56■■□□□ 1.04
TRIM28-201ENST00000253024 AP5M1Q9H0R1 490 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 RHOJQ9H4E5 214 aa21.56■■□□□ 1.04
TRIM28-201ENST00000253024 ABI2Q9NYB9 513 aaPredicted RBP21.56■■□□□ 1.04
TRIM28-201ENST00000253024 GNEQ9Y223 722 aaKnown RBP21.56■■□□□ 1.04
TRIM28-201ENST00000253024 LRRC14BA6NHZ5 514 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 UQCRBP14927 111 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 CD52P31358 61 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 IRX1P78414 480 aaPredicted RBP21.55■■□□□ 1.04
TRIM28-201ENST00000253024 ZYG11AQ6WRX3 759 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 TRIM67Q6ZTA4 783 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 MIB1Q86YT6 1006 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 ATP6V1E2Q96A05 226 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 RPL10LQ96L21 214 aaKnown RBP21.55■■□□□ 1.04
TRIM28-201ENST00000253024 KLHL32Q96NJ5 620 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 GPR22Q99680 433 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 OLFM1Q99784 485 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 RTP3Q9BQQ7 232 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 CNGB3Q9NQW8 809 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 SORCS3Q9UPU3 1222 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 SLC12A1Q13621 1099 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 CYTH1Q15438 398 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 STXBP5Q5T5C0 1151 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 AGMOQ6ZNB7 445 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 KCTD13Q8WZ19 329 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 PKP2Q99959 881 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 DRC3Q9H069 523 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 OSBPL2Q9H1P3 480 aa21.55■■□□□ 1.04
TRIM28-201ENST00000253024 RGSL1A5PLK6 1076 aa21.54■■□□□ 1.04
TRIM28-201ENST00000253024 HHLA1C9JL84 531 aa21.54■■□□□ 1.04
TRIM28-201ENST00000253024 J3KR12 359 aa21.54■■□□□ 1.04
TRIM28-201ENST00000253024 TOMM70O94826 608 aa21.54■■□□□ 1.04
TRIM28-201ENST00000253024 CCDC166P0CW27 439 aa21.54■■□□□ 1.04
TRIM28-201ENST00000253024 RPL10P27635 214 aaKnown RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms