RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 PCDHB8Q9UN66 801 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 RAP2CQ9Y3L5 183 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 HTTP42858 3142 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 PDE5AO76074 875 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 PIGNO95427 931 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 NUMBP49757 651 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 EPHB1P54762 984 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 MLLT6P55198 1093 aaPredicted RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 RAB10P61026 200 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 BTKQ06187 659 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 KLF10Q13118 480 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 UGP2Q16851 508 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 PGM2L1Q6PCE3 622 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 LMNTD2Q8IXW0 634 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 ACTRT2Q8TDY3 377 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 MICAL1Q8TDZ2 1067 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 NXNL1Q96CM4 212 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 TSNARE1Q96NA8 513 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 GPAMQ9HCL2 828 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 XPR1Q9UBH6 696 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 IPO11Q9UI26 975 aaKnown RBP19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 ACOT9Q9Y305 439 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 FRMPD3Q5JV73 1810 aa19.78■□□□□ 0.76
CDC42EP1-201ENST00000249014 CCNT2O60583 730 aaKnown RBP19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 PEX11BO96011 259 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 COX4I1P13073 169 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 PAX3P23760 479 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 CCND3P30281 292 aaPredicted RBP19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 RPL14P50914 215 aaKnown RBP19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 PCSK7Q16549 785 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 TRIM71Q2Q1W2 868 aaKnown RBP19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 FSCBQ5H9T9 825 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 CCSAPQ6IQ19 270 aaPredicted RBP19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 SPNS2Q8IVW8 549 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 TTC1Q99614 292 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 MRM3Q9HC36 420 aaKnown RBP19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 ZDHHC2Q9UIJ5 367 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 CDH22Q9UJ99 828 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 PLXNA3P51805 1871 aa19.77■□□□□ 0.76
CDC42EP1-201ENST00000249014 NEMP1O14524 444 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 AURKAO14965 403 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 DLX3O60479 287 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 SLC10A3P09131 477 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 COL6A2P12110 1019 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 STMN1P16949 149 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 PSEN1P49768 467 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 AP2B1P63010 937 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 CUL3Q13618 768 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 SEPT6Q14141 434 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 DDR2Q16832 855 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 TSTD2Q5T7W7 516 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 TMCO4Q5TGY1 634 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 METTL21CQ5VZV1 264 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZNF470Q6ECI4 717 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 RTN4RL1Q86UN2 441 aaPredicted RBP19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 LCA5Q86VQ0 697 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 DEFB107AQ8IZN7 70 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 LSMEM2Q8N112 164 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 C2CD4AQ8NCU7 369 aaPredicted RBP19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 PPFIBP2Q8ND30 876 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 KLHDC9Q8NEP7 349 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 PTCD2Q8WV60 388 aaKnown RBP19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 SERPINB11Q96P15 392 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 LRCH1Q9Y2L9 728 aa19.77■□□□□ 0.75
CDC42EP1-201ENST00000249014 HDAC3O15379 428 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 MAP3K7O43318 606 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 GRID2O43424 1007 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 EPHA3P29320 983 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 WNT3AP56704 352 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 TAS2R39P59534 338 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 NRG1Q02297 640 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 TMC7Q7Z402 723 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 TFAP2DQ7Z6R9 452 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 EFCAB3Q8N7B9 438 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 SLC39A13Q96H72 371 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 LENG8Q96PV6 779 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZCWPW1Q9H0M4 648 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 ARHGEF37A1IGU5 675 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 A6NHS1 94 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 INPPL1O15357 1258 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 SKIP12755 728 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 TFEBP19484 476 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 PRDX6P30041 224 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 INHBEP58166 350 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 USP46P62068 366 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 LSM12Q3MHD2 195 aaKnown RBP19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 SEL1L3Q68CR1 1132 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 KIAA0930Q6ICG6 404 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZNF280DQ6N043 979 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 KDELC1Q6UW63 502 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 ZNF683Q8IZ20 524 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 UCMAQ8WVF2 138 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 ELMO2Q96JJ3 720 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 C1orf74Q96LT6 269 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 OMDQ99983 421 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 UBE2OQ9C0C9 1292 aaKnown RBP19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 NMRK2Q9NPI5 230 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 TLR6Q9Y2C9 796 aa19.76■□□□□ 0.75
CDC42EP1-201ENST00000249014 WASH4PA8MWX3 477 aa19.75■□□□□ 0.75
CDC42EP1-201ENST00000249014 J3KR12 359 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms