RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 HARS2P49590 506 aaKnown RBP23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 GEMP55040 296 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 IHHQ14623 411 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 ACBD5Q5T8D3 534 aaPredicted RBP23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 PLD4Q96BZ4 506 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 AGAP2Q99490 1192 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 ATXN3LQ9H3M9 355 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 DONSONQ9NYP3 566 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 MYO9BQ13459 2157 aa23.69■■□□□ 1.38
SYNGR3-201ENST00000248121 CCT8L1PA6NM43 557 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 GREM1O60565 184 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 TOP3BO95985 862 aaKnown RBP23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 ITGA2BP08514 1039 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 ACVRL1P37023 503 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 SMAD3P84022 425 aaKnown RBP23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 TEDDM1Q5T9Z0 273 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 GDF15Q99988 308 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 DNMT3BQ9UBC3 853 aaKnown RBP23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 STARD13Q9Y3M8 1113 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 AP3B1O00203 1094 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 RAMP2O60895 175 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 HDCP19113 662 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 OR1E1P30953 314 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 RENBPP51606 427 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 MAXP61244 160 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 RPS24P62847 133 aaKnown RBP23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 NTHL1P78549 312 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 SERINC3Q13530 473 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 POLD3Q15054 466 aaPredicted RBP23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 SLC5A9Q2M3M2 681 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 KDELC1Q6UW63 502 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 RANBP10Q6VN20 620 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 NDUFAF2Q8N183 169 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 TEX26Q8N6G2 289 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 OR52K2Q8NGK3 314 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 PABPC5Q96DU9 382 aaKnown RBP23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 SLC25A51Q9H1U9 297 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 NT5MQ9NPB1 228 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 HCFC2Q9Y5Z7 792 aa23.68■■□□□ 1.38
SYNGR3-201ENST00000248121 BPTFQ12830 3046 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 C2orf16Q68DN1 1984 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 CCDC78A2IDD5 438 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 GP5P40197 560 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 MAPKAPK2P49137 400 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 PABPC1LQ4VXU2 614 aaKnown RBP23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 HSP90AA5PQ58FG0 334 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 CCDC121Q6ZUS5 278 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 GRAMD1AQ96CP6 724 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 IMP4Q96G21 291 aaKnown RBP23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 CPNE1Q99829 537 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 SP110Q9HB58 689 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 ASAH2Q9NR71 780 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 ZFP37Q9Y6Q3 630 aaPredicted RBP23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 MIA3Q5JRA6 1907 aa23.67■■□□□ 1.38
SYNGR3-201ENST00000248121 F5H5T6 163 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 TPP1O14773 563 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 MOSPD3O75425 235 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 MMP2P08253 660 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 CHRNA4P43681 627 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 SERPINB4P48594 390 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 PARP15Q460N3 678 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 MARC1Q5VT66 337 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 OTOAQ7RTW8 1153 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 ELMOD1Q8N336 334 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 PGBD5Q8N414 524 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 CCDC63Q8NA47 563 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 SHKBP1Q8TBC3 707 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 MRPS31Q92665 395 aaKnown RBP23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 AZIN2Q96A70 460 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 MANSC1Q9H8J5 431 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 ABCF3Q9NUQ8 709 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 RFXAPO00287 272 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 TSPAN3O60637 253 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 CRHR1P34998 444 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 TNK2Q07912 1038 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 MTA1Q13330 715 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 POU6F1Q14863 301 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 POTEHQ6S545 545 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 KDELC2Q7Z4H8 507 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 KCNMB4Q86W47 210 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 PPP1R2P1Q96PQ5 205 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 SLC46A2Q9BY10 475 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 ARL2BPQ9Y2Y0 163 aa23.66■■□□□ 1.38
SYNGR3-201ENST00000248121 NEBLO76041 1014 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 CKMP06732 381 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 SLC11A2P49281 568 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 WNT3AP56704 352 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 IL10RBQ08334 325 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 MPP3Q13368 585 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 PCID2Q5JVF3 399 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 PPP2R2DQ66LE6 453 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 PKN3Q6P5Z2 889 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 TRPM8Q7Z2W7 1104 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 ZNF354CQ86Y25 554 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 RIN3Q8TB24 985 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 THOC1Q96FV9 657 aaKnown RBP23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 RMDN2Q96LZ7 410 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 RBBP8Q99708 897 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 MCMBPQ9BTE3 642 aa23.65■■□□□ 1.38
SYNGR3-201ENST00000248121 IQCGQ9H095 443 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms