RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 NEBLO76041 1014 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 TBX18O95935 607 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 PRKCHP24723 683 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 TARSP26639 723 aaKnown RBP13.42□□□□□ -0.26
SLIRP-201ENST00000238688 PSMB4P28070 264 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 ELK3P41970 407 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 PFKPQ01813 784 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 MPP3Q13368 585 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 LAMB3Q13751 1172 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 POLD3Q15054 466 aaPredicted RBP13.42□□□□□ -0.26
SLIRP-201ENST00000238688 METTL3Q86U44 580 aaKnown RBP13.42□□□□□ -0.26
SLIRP-201ENST00000238688 CPXM2Q8N436 756 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 OR2W6PQ8NHA6 318 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 STAMBPL1Q96FJ0 436 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 SHDQ96IW2 340 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 SIGLEC10Q96LC7 697 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 LRRC3BQ96PB8 259 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 DHRS4Q9BTZ2 278 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 OSBPL6Q9BZF3 934 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 SLC39A8Q9C0K1 460 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 IL22Q9GZX6 179 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 SLC25A51Q9H1U9 297 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 CENPHQ9H3R5 247 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 HEBP1Q9NRV9 189 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 SEPT10Q9P0V9 454 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 SAMD15Q9P1V8 674 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 NUDT5Q9UKK9 219 aa13.42□□□□□ -0.26
SLIRP-201ENST00000238688 NOVA2Q9UNW9 492 aaKnown RBP13.42□□□□□ -0.26
SLIRP-201ENST00000238688 TRAV19A0A0A6YYK7 116 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 FAM170BA6NMN3 283 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 RASA4BC9J798 803 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 GOLGA8MH3BSY2 632 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 KCNK1O00180 336 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 RASA4O43374 803 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 ALDH1A2O94788 518 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 MAP3K6O95382 1288 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 TCF3P15923 654 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 PGAM1P18669 254 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 OR1E1P30953 314 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 CORO1AP31146 461 aaKnown RBP13.41□□□□□ -0.26
SLIRP-201ENST00000238688 SERPINB9P50453 376 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 CDH17Q12864 832 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 DNAJC3Q13217 504 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 SERINC3Q13530 473 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 FAM133BQ5BKY9 247 aaKnown RBP13.41□□□□□ -0.26
SLIRP-201ENST00000238688 RALGPS1Q5JS13 557 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 MARC1Q5VT66 337 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 RAP1GAP2Q684P5 730 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 ALG1LQ6GMV1 187 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 ADGRD1Q6QNK2 874 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 TPRG1Q6ZUI0 275 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF534Q76KX8 674 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 C14orf80Q86SX3 495 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 PDCD7Q8N8D1 485 aaKnown RBP13.41□□□□□ -0.26
SLIRP-201ENST00000238688 HJURPQ8NCD3 748 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-201ENST00000238688 GABPB2Q8TAK5 448 aaPredicted RBP13.41□□□□□ -0.26
SLIRP-201ENST00000238688 CDKL2Q92772 493 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 DNASE1L2Q92874 299 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 CLDN23Q96B33 292 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 MTBPQ96DY7 904 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 CAPS2Q9BXY5 557 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 SP110Q9HB58 689 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 MRM3Q9HC36 420 aaKnown RBP13.41□□□□□ -0.26
SLIRP-201ENST00000238688 GLOD4Q9HC38 313 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 CASS4Q9NQ75 786 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 RABGEF1Q9UJ41 708 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 TBC1D30Q9Y2I9 924 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 ZNF292O60281 2723 aa13.41□□□□□ -0.26
SLIRP-201ENST00000238688 WDR87Q6ZQQ6 2873 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 TCRBV9S1A1TA0A576 114 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 TLDC2A0PJX2 215 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 HEPACAM2A8MVW5 462 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 ZBTB24O43167 697 aaPredicted RBP13.4□□□□□ -0.26
SLIRP-201ENST00000238688 PRAMEF11O60813 436 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 JCHAINP01591 159 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 POLBP06746 335 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 MBL2P11226 248 aaPredicted RBP13.4□□□□□ -0.26
SLIRP-201ENST00000238688 PSMC3P17980 439 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 HDCP19113 662 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 PAPOLAP51003 745 aaKnown RBP13.4□□□□□ -0.26
SLIRP-201ENST00000238688 GPX6P59796 221 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 MAGOHP61326 146 aaKnown RBP13.4□□□□□ -0.26
SLIRP-201ENST00000238688 ZBTB17Q13105 803 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 UBXN2BQ14CS0 331 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 FASTKD3Q14CZ7 662 aaKnown RBP13.4□□□□□ -0.26
SLIRP-201ENST00000238688 MSS51Q4VC12 460 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 ARHGAP15Q53QZ3 475 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 SPANXN3Q5MJ09 141 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 NADSYN1Q6IA69 706 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 Q6ZNB5 142 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 HTR3DQ70Z44 454 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 TMEM150AQ86TG1 271 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 LRRC6Q86X45 466 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 C1orf210Q8IVY1 113 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 MFSD6LQ8IWD5 586 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 LGI2Q8N0V4 545 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
SLIRP-201ENST00000238688 SLC44A1Q8WWI5 657 aa13.4□□□□□ -0.26
SLIRP-201ENST00000238688 PEX13Q92968 403 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms