RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 CTAGE3PQ8IX95 158 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 SIPA1Q96FS4 1042 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 TEKT5Q96M29 485 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLC25A51Q9H1U9 297 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 XAB2Q9HCS7 855 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZDHHC4Q9NPG8 344 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 STX7O15400 261 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 RNF40O75150 1001 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 RNASEH2AO75792 299 aaKnown RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ETS1P14921 441 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 GLDCP23378 1020 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 DSC2Q02487 901 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ADCY2Q08462 1091 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 MPP3Q13368 585 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 HIF1AQ16665 826 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 ZNF567Q8N184 647 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 OR6P1Q8NGX9 317 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 SNX19Q92543 992 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 CDKL2Q92772 493 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 FRMD8Q9BZ67 464 aaPredicted RBP11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 MUTYHQ9UIF7 546 aa11.28□□□□□ -0.6
TNFAIP3-201ENST00000237289 HOXC13P31276 330 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 RPL22P35268 128 aaKnown RBP11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 DGKEP52429 567 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 CDK18Q07002 472 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 SGCGQ13326 291 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 DRICH1Q6PGQ1 229 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 FAM124AQ86V42 546 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 NLRP14Q86W24 1093 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLC35B2Q8TB61 432 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 MLPHQ9BV36 600 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 CCDC68Q9H2F9 335 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 ETNK1Q9HBU6 452 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 SAYSD1Q9NPB0 183 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 WNT16Q9UBV4 365 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 RAI2Q9Y5P3 530 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 STON1Q9Y6Q2 735 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 C5orf60A6NFR6 353 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 PMLP29590 882 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 CCNHP51946 323 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 SLC10A2Q12908 348 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 SPARCL1Q14515 664 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 UAP1Q16222 522 aaPredicted RBP11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 CFAP36Q96G28 342 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 TBL1YQ9BQ87 522 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 PCYOX1Q9UHG3 505 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 DUSP12Q9UNI6 340 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 SIT1Q9Y3P8 196 aa11.27□□□□□ -0.6
TNFAIP3-201ENST00000237289 ANHXE9PGG2 379 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 ITGA8P53708 1063 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 MRPS21P82921 87 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 CDH17Q12864 832 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 PDIA2Q13087 525 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 MYLK3Q32MK0 819 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 FUT11Q495W5 492 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 MANEALQ5VSG8 457 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 RPLP0P6Q8NHW5 317 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 LRRC3BQ96PB8 259 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 SRPK1Q96SB4 655 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 TBC1D17Q9HA65 648 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 SPATA6Q9NWH7 488 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 IL36AQ9UHA7 158 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 MOSPD1Q9UJG1 213 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 NEU2Q9Y3R4 380 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 PCDHGC4Q9Y5F7 938 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 COMMD10Q9Y6G5 202 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 PABPN1LA6NDY0 278 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 TTC34A8MYJ7 566 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 MAFKO60675 156 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 CRTAMO95727 393 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 WNT3AP56704 352 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF234Q14588 700 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 ARSIQ5FYB1 569 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZNF776Q68DI1 518 aaPredicted RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 BNIPLQ7Z465 357 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 NOA1Q8NC60 698 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 MRRFQ96E11 262 aaKnown RBP11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 CEP44Q9C0F1 390 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 PLXNA4Q9HCM2 1894 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 CHKBQ9Y259 395 aa11.27□□□□□ -0.61
TNFAIP3-201ENST00000237289 ZP2Q05996 745 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 SLMAPQ14BN4 828 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 ELF2Q15723 593 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 HSP90B2PQ58FF3 399 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 WFDC5Q8TCV5 224 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 CXorf40AQ8TE69 158 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 MYO19Q96H55 970 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 KLHL32Q96NJ5 620 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 GBA3Q9H227 469 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 ARFGAP3Q9NP61 516 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 CLEC4EQ9ULY5 219 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 SLC27A6Q9Y2P4 619 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 ARIH1Q9Y4X5 557 aaPredicted RBP11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 CCDC78A2IDD5 438 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 K7ERQ8 282 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 DCXO43602 365 aa11.26□□□□□ -0.61
TNFAIP3-201ENST00000237289 GCATO75600 419 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms