RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 STAG3L4Q8TBR4 150 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 GAD1Q99259 594 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ABCB10Q9NRK6 738 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 EGFL7Q9UHF1 273 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 SPATA31A6Q5VVP1 1343 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 TCRBV9S1A1TA0A576 114 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 TNK2Q07912 1038 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ABRAXAS1Q6UWZ7 409 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 MTG1Q9BT17 334 aaPredicted RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 ARHGAP28Q9P2N2 729 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ADAM28Q9UKQ2 775 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 DYRK3O43781 588 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 PIRTP0C851 137 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 UMPSP11172 480 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ATP6V1C1P21283 382 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ATP5F1P24539 256 aaPredicted RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 GUCA1AP43080 201 aaPredicted RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 RXRGP48443 463 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 SRP54P61011 504 aaKnown RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 MAXP61244 160 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 BROXQ5VW32 411 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ARHGAP36Q6ZRI8 547 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 SH3BP5LQ7L8J4 393 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 ITIH5Q86UX2 942 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 FAM83AQ86UY5 434 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 POLR1BQ9H9Y6 1135 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEK4-201ENST00000233027 PNMA8CA0A1B0GUJ8 204 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 PRR5-ARHGAP8B1AHC4 643 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 TAF4O00268 1085 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 GJB1P08034 283 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 DGKAP23743 735 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 RPL38P63173 70 aaKnown RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 ARHGAP8P85298 464 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 RGS21Q2M5E4 152 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 INO80DQ53TQ3 878 aaPredicted RBP13.51□□□□□ -0.25
NEK4-201ENST00000233027 WDR60Q8WVS4 1066 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 PPP1R14AQ96A00 147 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 REPS1Q96D71 796 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 FGFBP2Q9BYJ0 223 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 UBAP1Q9NZ09 502 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 SORCS3Q9UPU3 1222 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 GMPPBQ9Y5P6 360 aa13.51□□□□□ -0.25
NEK4-201ENST00000233027 BAZ2BQ9UIF8 2168 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 DYTNA2CJ06 578 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CLDN5O00501 218 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 AHCYL1O43865 530 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ZBTB11O95625 1053 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 IL6P05231 212 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PSEN2P49810 448 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PRKAG1P54619 331 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ACSM2AQ08AH3 577 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 GALNT3Q14435 633 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 UGCGQ16739 394 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 AP5B1Q2VPB7 878 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ARMC3Q5W041 872 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ACSM2BQ68CK6 577 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PHF13Q86YI8 300 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 ZNF540Q8NDQ6 660 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ST13P5Q8NFI4 369 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 ALG3Q92685 438 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PANX3Q96QZ0 392 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 FANCEQ9HB96 536 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 DBTP11182 482 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 NPR3P17342 541 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 EPHX2P34913 555 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PTSQ03393 145 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CDH24Q86UP0 819 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 NT5DC4Q86YG4 428 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CROCCP3Q8IVE0 287 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 OR52K2Q8NGK3 314 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 EBNA1BP2Q99848 306 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 CDH19Q9H159 772 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 SPG21Q9NZD8 308 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 GGA2Q9UJY4 613 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 DDX3YO15523 660 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 RTN3O95197 1032 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 SP100P23497 879 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 GABRB2P47870 512 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 RAB27AP51159 221 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 SCNN1GP51170 649 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 TCEA2Q15560 299 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 POM121L1PQ3SYA9 428 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CMC1Q7Z7K0 106 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 KRT73Q86Y46 540 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 TMPRSS4Q9NRS4 437 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 FAM198AQ9UFP1 575 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 CDH9Q9ULB4 789 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 AP4B1Q9Y6B7 739 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 ADGRB1O14514 1584 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 ADM5C9JUS6 153 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 TP73O15350 636 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 HGFP14210 728 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 AXLP30530 894 aa13.5□□□□□ -0.25
NEK4-201ENST00000233027 PURAQ00577 322 aaKnown RBP13.5□□□□□ -0.25
NEK4-201ENST00000233027 MTX3Q5HYI7 312 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms