RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 PPP2R2DQ66LE6 453 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 PGAM4Q8N0Y7 254 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 KYQ8NBH2 561 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 HTR3CQ8WXA8 447 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 MPP4Q96JB8 637 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 FERMT1Q9BQL6 677 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 C17orf80Q9BSJ5 609 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 OCEL1Q9H607 264 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 MRGBPQ9NV56 204 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 UBAP1Q9NZ09 502 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 UBQLN1Q9UMX0 589 aaKnown RBP20.85■□□□□ 0.93
SNX3-201ENST00000230085 DERAQ9Y315 318 aa20.85■□□□□ 0.93
SNX3-201ENST00000230085 MYO9BQ13459 2157 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 KIAA1671Q9BY89 1806 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 WDR27A2RRH5 827 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 CAPN8A6NHC0 703 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 SLCO1B7G3V0H7 640 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 CRTAMO95727 393 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 ALDH2P05091 517 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 GALTP07902 379 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 PMLP29590 882 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 HADHAP40939 763 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 OR1G1P47890 313 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 SLC11A1P49279 550 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 ALDH7A1P49419 539 aaKnown RBP20.84■□□□□ 0.93
SNX3-201ENST00000230085 NR1H2P55055 460 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 CNGA3Q16281 694 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 TRPC4APQ8TEL6 797 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 KBTBD7Q8WVZ9 684 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 HEXIM2Q96MH2 286 aaKnown RBP20.84■□□□□ 0.93
SNX3-201ENST00000230085 CERS4Q9HA82 394 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 TSPAN16Q9UKR8 245 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 LZTS1Q9Y250 596 aa20.84■□□□□ 0.93
SNX3-201ENST00000230085 F8W810 466 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 G3V2L1 256 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 MATN2O00339 956 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 NRP1O14786 923 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 DCXO43602 365 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 IGFBP6P24592 240 aaPredicted RBP20.83■□□□□ 0.93
SNX3-201ENST00000230085 GLUD2P49448 558 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 CLCNKBP51801 687 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 LIMK2P53671 638 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 GBE1Q04446 702 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 LRRC36Q1X8D7 754 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 COLGALT1Q8NBJ5 622 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 CCDC124Q96CT7 223 aaKnown RBP20.83■□□□□ 0.93
SNX3-201ENST00000230085 PIWIL1Q96J94 861 aaKnown RBP20.83■□□□□ 0.93
SNX3-201ENST00000230085 CATSPER2Q96P56 530 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 TSPAN18Q96SJ8 248 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 RBBP8Q99708 897 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 TRIM56Q9BRZ2 755 aaKnown RBP20.83■□□□□ 0.93
SNX3-201ENST00000230085 MCMBPQ9BTE3 642 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 NT5C1AQ9BXI3 368 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 TCF7L2Q9NQB0 619 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 CLIC5Q9NZA1 410 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 DTLQ9NZJ0 730 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 AP4B1Q9Y6B7 739 aa20.83■□□□□ 0.93
SNX3-201ENST00000230085 NLRC5Q86WI3 1866 aa20.83■□□□□ 0.92
SNX3-201ENST00000230085 BCAS2O75934 225 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 SORBS2O94875 1100 aaKnown RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 POLBP06746 335 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 ETS2P15036 469 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 TYK2P29597 1187 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 SPRP35270 261 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 GRIA1P42261 906 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 HPCAP84074 193 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 SULT2A1Q06520 285 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 NADK2Q4G0N4 442 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 TCHHL1Q5QJ38 904 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 KLHDC10Q6PID8 442 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 BNC2Q6ZN30 1099 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 RBM44Q6ZP01 1051 aaKnown RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 SLC26A9Q7LBE3 791 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 TMEM173Q86WV6 379 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 BEST2Q8NFU1 509 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 SLC35F5Q8WV83 523 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 LRCH3Q96II8 777 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 CSPG4P5Q96PW8 444 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 GCNAQ96QF7 691 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 CYP4F11Q9HBI6 524 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 NGRNQ9NPE2 291 aaKnown RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 DPP3Q9NY33 737 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 IGSF9Q9P2J2 1179 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 VTI1BQ9UEU0 232 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 PRG3Q9Y2Y8 225 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 TRIM13O60858 407 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 OR6B1O95007 311 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 ITGB3P05106 788 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 KRT19P08727 400 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 SPATA31D3P0C874 917 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 LAG3P18627 525 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 NCF2P19878 526 aaPredicted RBP20.82■□□□□ 0.92
SNX3-201ENST00000230085 PIK3R1P27986 724 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 BMPR1AP36894 532 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 MYBPC1Q00872 1141 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 MYBPC3Q14896 1274 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 UPP1Q16831 310 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.82■□□□□ 0.92
SNX3-201ENST00000230085 NCBP2-AS2Q69YL0 99 aa20.82■□□□□ 0.92
SNX3-201ENST00000230085 SPATA31D4Q6ZUB0 917 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms