RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 CRYBG2Q8N1P7 616 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 PELI3Q8N2H9 469 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 CNTD1Q8N815 330 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 USP33Q8TEY7 942 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 SNRNP27Q8WVK2 155 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 SREK1Q8WXA9 508 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 DLG3Q92796 817 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 CELF6Q96J87 481 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 WDR90Q96KV7 1748 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 TMEM79Q9BSE2 394 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 CYP4F12Q9HCS2 524 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 CCDC167Q9P0B6 97 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 PIM2Q9P1W9 311 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 SLC2A6Q9UGQ3 507 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 ARHGAP10A1A4S6 786 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 SOCS2O14508 198 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 H6PDO95479 791 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 JCHAINP01591 159 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 ZNF23P17027 643 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 UGT1A6P19224 532 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 ARNTP27540 789 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 ADRA1BP35368 520 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 SNX16P57768 344 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 TXNL4AP83876 142 aaKnown RBP12.55□□□□□ -0.4
NUP88-201ENST00000225696 POU5F1BQ06416 359 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 ARHGAP1Q07960 439 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 TMED1Q13445 227 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 LRP8Q14114 963 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 C6orf10Q5SRN2 563 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 KLC3Q6P597 504 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 PAQR9Q6ZVX9 377 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 UNC93AQ86WB7 457 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 HERC6Q8IVU3 1022 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 TRIML2Q8N7C3 387 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 SPPL2BQ8TCT7 592 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 DDI1Q8WTU0 396 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 MAELQ96JY0 434 aaKnown RBP12.55□□□□□ -0.4
NUP88-201ENST00000225696 SNX27Q96L92 541 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 MAF1Q9H063 256 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 TRPV6Q9H1D0 765 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 GBA3Q9H227 469 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 RHOJQ9H4E5 214 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 DUS2Q9NX74 493 aaKnown RBP12.55□□□□□ -0.4
NUP88-201ENST00000225696 CACNA2D2Q9NY47 1150 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 GTSE1Q9NYZ3 720 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 RSL24D1Q9UHA3 163 aaKnown RBP12.55□□□□□ -0.4
NUP88-201ENST00000225696 PLXNA1Q9UIW2 1896 aa12.55□□□□□ -0.4
NUP88-201ENST00000225696 H3BNH8 94 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 TRIM24O15164 1050 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SLC22A2O15244 555 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 TIPRLO75663 272 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 ZBTB7AO95365 584 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 MT-CYBP00156 380 aaPredicted RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 C8BP07358 591 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 CYP2C8P10632 490 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 RPS12P25398 132 aaKnown RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 PLK1P53350 603 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 RHDQ02161 417 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SULT2A1Q06520 285 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SOX4Q06945 474 aaPredicted RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 DCTN2Q13561 401 aaKnown RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 POU6F1Q14863 301 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 MARCH8Q5T0T0 291 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 IL31Q6EBC2 164 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 ESRP1Q6NXG1 681 aaKnown RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 ARHGAP36Q6ZRI8 547 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 OSTM1Q86WC4 334 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 WDR6Q9NNW5 1121 aaKnown RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 TIMMDC1Q9NPL8 285 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 CACNG4Q9UBN1 327 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 VTI1BQ9UEU0 232 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 TDRKHQ9Y2W6 561 aaKnown RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 MTF2Q9Y483 593 aaPredicted RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 SBF1O95248 1867 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 YJEFN3A6XGL0 299 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 HSPA1AP0DMV8 641 aaKnown RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 HSPA1BP0DMV9 641 aaKnown RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 TSPAN8P19075 237 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 NOS2P35228 1153 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SCNN1AP37088 669 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 HSPA13P48723 471 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SEMA3BQ13214 749 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SLC12A1Q13621 1099 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 LAMC2Q13753 1193 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 AGKQ53H12 422 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 ZNF484Q5JVG2 852 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 FBXO47Q5MNV8 452 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 REP15Q6BDI9 236 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 TRIM67Q6ZTA4 783 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 LPCAT2Q7L5N7 544 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 KDELC2Q7Z4H8 507 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 SETD3Q86TU7 594 aaPredicted RBP12.54□□□□□ -0.4
NUP88-201ENST00000225696 RDH11Q8TC12 318 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 HEXDCQ8WVB3 486 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 HSFY1Q96LI6 401 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 RANBP9Q96S59 729 aa12.54□□□□□ -0.4
NUP88-201ENST00000225696 RNF39Q9H2S5 420 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms