RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 A0A087WXM4 84 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 TRAV19A0A0A6YYK7 116 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 TSPAN8P19075 237 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 ATP4AP20648 1035 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 PRKCIP41743 596 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 DGCR6Q14129 220 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 CATSPERGQ6ZRH7 1159 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 RIOX2Q8IUF8 465 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 COL26A1Q96A83 441 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 OMDQ99983 421 aa18.04■□□□□ 0.48
EXTL3-201ENST00000220562 GUCY1B2O75343 617 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 IL6P05231 212 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 ITGAVP06756 1048 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 SNRPB2P08579 225 aaKnown RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 AUHQ13825 339 aaKnown RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 PRAMEF19Q5SWL8 479 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 GPC2Q8N158 579 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 QRFPRQ96P65 431 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 RNF157Q96PX1 679 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 GINS4Q9BRT9 223 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 ZYG11BQ9C0D3 744 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 CLEC4MQ9H2X3 399 aaPredicted RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 CDH9Q9ULB4 789 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 SNRPD1P62314 119 aaKnown RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 MRPS6P82932 125 aaKnown RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 EIF3MQ7L2H7 374 aaKnown RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 SPATA6LQ8N4H0 392 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 PIWIL2Q8TC59 973 aaKnown RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 KCTD4Q8WVF5 259 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 NRCAMQ92823 1304 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 IRF8Q02556 426 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 IL17AQ16552 155 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 SPANXN2Q5MJ10 180 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 IRGCQ6NXR0 463 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 HAS1Q92839 578 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 SGTAO43765 313 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 NTRK1P04629 796 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 CLCN5P51795 746 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 KLHL31Q9H511 634 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 FAM198AQ9UFP1 575 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 ZNF37AP17032 561 aaPredicted RBP18.03■□□□□ 0.48
EXTL3-201ENST00000220562 GOT1P17174 413 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 TOMM20Q15388 145 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 RNF43Q68DV7 783 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 ZNF549Q6P9A3 640 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 FAM71AQ8IYT1 594 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 ATAD3AQ9NVI7 634 aa18.03■□□□□ 0.48
EXTL3-201ENST00000220562 SF3B1O75533 1304 aaKnown RBP eCLIP18.02■□□□□ 0.483e-6■■■■■ 137.9
EXTL3-201ENST00000220562 SNPHO15079 494 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 GALNT3Q14435 633 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 PACS2Q86VP3 889 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 LPPQ93052 612 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 FHDC1Q9C0D6 1143 aaPredicted RBP18.02■□□□□ 0.48
EXTL3-201ENST00000220562 PCDH12Q9NPG4 1184 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 SLC12A4Q9UP95 1085 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 LRRIQ1Q96JM4 1722 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 PDE2AO00408 941 aaPredicted RBP18.02■□□□□ 0.48
EXTL3-201ENST00000220562 CYP2C18P33260 490 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 HECTD3Q5T447 861 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 DNAJB14Q8TBM8 379 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 HMX1Q9NP08 348 aaPredicted RBP18.02■□□□□ 0.48
EXTL3-201ENST00000220562 VAV3Q9UKW4 847 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 ARIH1Q9Y4X5 557 aaPredicted RBP18.02■□□□□ 0.48
EXTL3-201ENST00000220562 PREX1Q8TCU6 1659 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 PDE9AO76083 593 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 FGRP09769 529 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 RAB10P61026 200 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 FMO1Q01740 532 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 TOP3AQ13472 1001 aaPredicted RBP18.02■□□□□ 0.48
EXTL3-201ENST00000220562 IRAK1BP1Q5VVH5 260 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 ZNF655Q8N720 491 aaPredicted RBP18.02■□□□□ 0.48
EXTL3-201ENST00000220562 BPIFB6Q8NFQ5 453 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 ZNF671Q8TAW3 534 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 TMEM51Q9NW97 253 aa18.02■□□□□ 0.48
EXTL3-201ENST00000220562 LOC100506127A0A0U1RQW1 187 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 PNMA8CA0A1B0GUJ8 204 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 TBC1D3BA6NDS4 549 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 MLYCDO95822 493 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 CHN2P52757 468 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 IKBKEQ14164 716 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 RAET1GQ6H3X3 334 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 EFCAB3Q8N7B9 438 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 TMEM161BQ8NDZ6 487 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 REXO5Q96IC2 774 aaKnown RBP18.02■□□□□ 0.47
EXTL3-201ENST00000220562 ZFP14Q9HCL3 533 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 GPSM3Q9Y4H4 160 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 ZW10O43264 779 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 MAFO75444 373 aaPredicted RBP18.02■□□□□ 0.47
EXTL3-201ENST00000220562 CATP04040 527 aaKnown RBP18.02■□□□□ 0.47
EXTL3-201ENST00000220562 CDC25CP30307 473 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 IL12RB1P42701 662 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 NAGLUP54802 743 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 ZIK1Q3SY52 487 aaPredicted RBP18.02■□□□□ 0.47
EXTL3-201ENST00000220562 ARMC3Q5W041 872 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 PACSIN3Q9UKS6 424 aa18.02■□□□□ 0.47
EXTL3-201ENST00000220562 CTSEP14091 401 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 ITGAXP20702 1163 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 ATP5F1P24539 256 aaPredicted RBP18.01■□□□□ 0.47
EXTL3-201ENST00000220562 CDC42P60953 191 aa18.01■□□□□ 0.47
EXTL3-201ENST00000220562 PABPC1LQ4VXU2 614 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms