RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 ZBTB17Q13105 803 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 ZNF484Q5JVG2 852 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 LRRC8EQ6NSJ5 796 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 HFE2Q6ZVN8 426 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 UNC93AQ86WB7 457 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 RNF135Q8IUD6 432 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 TMEM126BQ8IUX1 230 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 PPP1R13LQ8WUF5 828 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CIB1Q99828 191 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 LRRC4Q9HBW1 653 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CYP4F12Q9HCS2 524 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 TRPC7Q9HCX4 862 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 CCDC167Q9P0B6 97 aa10.65□□□□□ -0.7
CX3CL1-201ENST00000006053 TADA2AO75478 443 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 JCHAINP01591 159 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 LGALS2P05162 132 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 AKAP5P24588 427 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 GRM5P41594 1212 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 MPP1Q00013 466 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 NSUN2Q08J23 767 aaKnown RBP eCLIP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 DCTN2Q13561 401 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC12A1Q13621 1099 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 PAFAH1B3Q15102 231 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 MTX3Q5HYI7 312 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 OTUD1Q5VV17 481 aaPredicted RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 FAM219BQ5XKK7 198 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 RPS27LQ71UM5 84 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 PDZD4Q76G19 769 aaPredicted RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 LPCAT2Q7L5N7 544 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 ZC3HC1Q86WB0 502 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 NT5DC4Q86YG4 428 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 DENND6AQ8IWF6 608 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 TMEM151AQ8N4L1 468 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 CNTD1Q8N815 330 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 GAB3Q8WWW8 586 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 LPGAT1Q92604 370 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 GPR22Q99680 433 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 HAUS8Q9BT25 410 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 CENPOQ9BU64 300 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 C1QTNF1Q9BXJ1 281 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 EIF2AQ9BY44 585 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 IL22Q9GZX6 179 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 ZNF385DQ9H6B1 395 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 RSL24D1Q9UHA3 163 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 ACOT9Q9Y305 439 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SNX10Q9Y5X0 201 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SLCO1B7G3V0H7 640 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 DCLK1O15075 740 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 AHSGP02765 367 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC35E2BP0CK96 405 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 CYP2B6P20813 491 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 CDH15P55291 814 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 POU5F1BQ06416 359 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 DPYSQ14117 519 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 TTLL4Q14679 1199 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 KCTD2Q14681 263 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 AGKQ53H12 422 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 CELF6Q96J87 481 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 HSFY1Q96LI6 401 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC29A1Q99808 456 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 GOLGA2P5Q9HBQ8 144 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 INIPQ9NRY2 104 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 STAP1Q9ULZ2 295 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 BEST1O76090 585 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 RPL10P27635 214 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 EPHX2P34913 555 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 NOS2P35228 1153 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 VGLL4Q14135 290 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 IKBKEQ14164 716 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 TRIM25Q14258 630 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 POU6F1Q14863 301 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 HERC3Q15034 1050 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 C9orf57Q5W0N0 161 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 OTOP3Q7RTS5 596 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 HERC6Q8IVU3 1022 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 CENPLQ8N0S6 344 aaPredicted RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 NUP93Q8N1F7 819 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SIX6OS1Q8N1H7 587 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 NPWQ8N729 165 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 KDM1BQ8NB78 822 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 RNF169Q8NCN4 708 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 RDH11Q8TC12 318 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 STYXQ8WUJ0 223 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 FTHL17Q9BXU8 183 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SLC2A11Q9BYW1 496 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 FAM49AQ9H0Q0 323 aaPredicted RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 RHOJQ9H4E5 214 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 NOL11Q9H8H0 719 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 TIMMDC1Q9NPL8 285 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 ANKRD6Q9Y2G4 727 aa10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 MRPL42Q9Y6G3 142 aaKnown RBP10.64□□□□□ -0.71
CX3CL1-201ENST00000006053 SDHDO14521 159 aa10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 SPTLC1O15269 473 aa10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 CKMT2P17540 419 aa10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 GABRB3P28472 473 aa10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 FBXO47Q5MNV8 452 aa10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 KDELC2Q7Z4H8 507 aa10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 CTU1Q7Z7A3 348 aaKnown RBP10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 APOBEC3FQ8IUX4 373 aaKnown RBP10.63□□□□□ -0.71
CX3CL1-201ENST00000006053 CEP97Q8IW35 865 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms