RNA–Protein interactions for RNA: ENSMUST00000190193.7

Col6a5-203, Transcript of Collagen alpha-5(VI) chain, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Col6a5, Length 9,289 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-203ENSMUST00000190193 Nr0b1Q61066 472 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ssxb3Q6XAS4 170 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ldoc1Q7TPY9 151 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Cpsf4Q8BQZ5 211 aaKnown RBP10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Spdye4bQ8CDE8 236 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 OlahQ8R197 265 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Tmem150aQ91WN2 271 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Exosc4Q921I9 245 aaKnown RBP10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Mgrn1Q9D074 532 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Hmgn3Q9DCB1 99 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Scnn1bQ9WU38 638 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Gm28363A0A087WQW2 129 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Gm14401A2ARV7 303 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Vmn2r50E9PW61 861 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Clk2O35491 499 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Gadd45gip1Q9CR59 222 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Prl7c1Q9CRB5 251 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Lima1Q9ERG0 753 aaKnown RBP10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Rps6ka4Q9Z2B9 773 aa10.16□□□□□ -0.78
Col6a5-203ENSMUST00000190193 YwhaqP68254 245 aaKnown RBP10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Fbp2P70695 339 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 LbpQ61805 481 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Oxnad1Q8VE38 311 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Olfr541Q8VGM0 312 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Erp27Q9D8U3 272 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Paqr5Q9DCU0 330 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ubqln2Q9QZM0 638 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Skp1Q9WTX5 163 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 9930021J03RikH3BKP8 2027 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Prdm12A2AJ77 365 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ankrd63A2ARS0 390 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Gm13128L7MU96 475 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Rab10P61027 200 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Man2a2Q8BRK9 1152 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Dlg2Q91XM9 852 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Efcab9Q9DAM2 216 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 NkaplQ5SZT7 395 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Olfr1361Q8VFH0 317 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Snx15Q91WE1 337 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ppp1r3gQ9CW07 347 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Zbtb32Q9JKD9 465 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Asap1Q9QWY8 1147 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Galk1Q9R0N0 392 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ttc23lA6H6E9 458 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Nipsnap3aB1AWZ3 247 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Mup3P04939 184 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Stfa3P35173 103 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Olfr1057Q7TR75 315 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Zfp446Q8C9M8 523 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Rcor1Q8CFE3 480 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Wrap53Q8VC51 532 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ttc39cQ8VE09 580 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Lrrc49Q91YK0 686 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Hm13Q9D8V0 378 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Znf207Q9JMD0 495 aaKnown RBP10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Zfp142G5E869 1843 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Unc13bQ9Z1N9 1602 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ankle1A8VU90 534 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Wdr72D3YYM4 1114 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Msl3l2G3X992 371 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Cbfa2t3O54972 620 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Polr1cP52432 346 aaKnown RBP10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Usp46P62069 366 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 YdjcQ14BV6 310 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Slc29a2Q61672 456 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Hbs1lQ69ZS7 682 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Awat2Q6E1M8 333 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 CltbQ6IRU5 229 aaKnown RBP10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Tbx10Q810F8 385 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Wdr11Q8K1X1 1223 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Cox18Q8VC74 331 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Syvn1Q9DBY1 612 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Tbx20Q9ES03 445 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ssxb9A2BI93 185 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ccdc8D3YZV8 685 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Mroh5E9PUJ8 762 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Rgs5O08850 181 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Celf1P28659 486 aaKnown RBP10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 DtymkP97930 212 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Zmym5Q3U2E2 627 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Trim40Q3UWA4 246 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Gpr151Q7TSN6 422 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Thnsl1Q8BH55 747 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ssh3Q8K330 649 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Mospd1Q8VEL0 213 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Wdr64Q9D565 1086 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Panx1Q9JIP4 426 aa10.15□□□□□ -0.78
Col6a5-203ENSMUST00000190193 Ddi2A2ADY9 399 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Anxa6P14824 673 aaKnown RBP10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Mapkapk2P49138 386 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Psd3Q2PFD7 1037 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Fam71bQ5STT6 665 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Pim2Q62070 370 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Catsper4Q8BVN3 442 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Fmo2Q8K2I3 535 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 4930550L24RikQ99PA7 320 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Tdrd12Q9CWU0 1215 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 Rasgef1cQ9D300 466 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 CabyrQ9D424 453 aa10.15□□□□□ -0.79
Col6a5-203ENSMUST00000190193 AnkhQ9JHZ2 492 aa10.15□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 35.6 ms