RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Arhgap20Q6IFT4 1182 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Acap2Q6ZQK5 770 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Slc39a4Q78IQ7 660 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cpa1Q7TPZ8 419 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gtf2a2Q80ZM7 109 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Nudcd3Q8R1N4 363 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Olfr847Q8VFF4 312 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Pcdhgb1Q91XX8 918 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tmem135Q9CYV5 458 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Stau1Q9Z108 487 aaKnown RBP16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 BC025446A0A087WQT1 134 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Kcng1A2BDX4 514 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Kifc5bE9PUA5 672 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cdh18E9Q9Q6 790 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vmn2r86G5E8Y4 848 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Folr1P35846 255 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Btbd1P58544 488 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cdh6P97326 790 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Atxn7l3bQ3UD01 97 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Trmt10cQ3UFY8 414 aaKnown RBP16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Klra8Q60682 266 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ip6k1Q6PD10 433 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tas2r109Q7M707 316 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ano4Q8C5H1 955 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cwf19l1Q8CI33 537 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ca12Q8CI85 354 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Agpat3Q9D517 376 aa16.1■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vmn2r103E9PWW0 856 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ccl26F8VQM2 93 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Got2P05202 430 aaKnown RBP16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 HdcP23738 662 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 GemP55041 295 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 OtulinQ3UCV8 352 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 ADGRF3Q58Y75 991 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Olfr464Q5SW48 313 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cox8aQ64445 69 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Nemp1Q6ZQE4 437 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Crb2Q80YA8 1282 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Znf771Q8BJ90 317 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Znf689Q8BKK5 500 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Dok4Q99KE3 325 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Anks3Q9CZK6 655 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Actrt2Q9D9L5 377 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Kat6aQ8BZ21 2003 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Dhx35A2ACQ1 703 aaKnown RBP16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ttll11A4Q9F4 727 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Fbxl18E9PYR1 771 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Limk2O54785 638 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 NmbrO54799 390 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tnfaip1O70479 316 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 P04214 136 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 AcrP23578 436 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Togaram2Q3TYG6 1002 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Lmf1Q3U3R4 574 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Itm2aQ61500 263 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Fam109aQ8BH49 266 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Snx30Q8CE50 437 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tfb1mQ8JZM0 345 aaKnown RBP16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 FgbQ8K0E8 481 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ppp4r1Q8K2V1 951 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Retreg3Q9CQV4 466 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ovca2Q9D7E3 225 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Zfc3h1B2RT41 1992 aaKnown RBP16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Igkv18-36A0A075B5M9 114 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Zfp626A0A0U1RQ84 676 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Sept7O55131 436 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tlx1P43345 332 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Itga4Q00651 1039 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Prickle1Q3U5C7 832 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 ChukQ60680 745 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ptk6Q64434 451 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cdc14bQ6PFY9 485 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Arhgap26Q6ZQ82 814 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Fastkd5Q7TMV3 762 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ostm1Q8BGT0 338 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vmn1r188Q8K3N2 308 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 GrpQ8R1I2 146 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Asz1Q8VD46 475 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tcf7l2Q924A0 459 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ttc9bQ9D6E4 239 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Mpp6Q9JLB0 553 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Tle6Q9WVB3 581 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Vwa8Q8CC88 1905 aa16.09■□□□□ 0.17
Trim39-203ENSMUST00000113706 Raph1F2Z3U3 1266 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Ebf2O08792 575 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 TertO70372 1122 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Aff3P51827 1254 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 CstaP56567 97 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Eml1Q05BC3 814 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 PigaQ64323 485 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Far2Q7TNT2 515 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Stx18Q8VDS8 334 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Alg14Q9D081 217 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Gde1Q9JL56 331 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Cyth1Q9QX11 398 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Chrna6Q9R0W9 494 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Sept6Q9R1T4 434 aa16.08■□□□□ 0.17
Trim39-203ENSMUST00000113706 Arfip1G5E8V9 373 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Aldh1a1P24549 501 aa16.08■□□□□ 0.16
Trim39-203ENSMUST00000113706 Fam35aQ3UEN2 891 aa16.08■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 28.4 ms