RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Cdk20Q9JHU3 346 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Aqp5Q9WTY4 265 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slc6a21A0A1B0GSD2 748 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 AcadlP51174 430 aaKnown RBP12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 NrlP54846 237 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nat8lQ3UGX3 299 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slfn4Q3UV66 602 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cyp4f37Q3V1F1 546 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gstt2Q61133 244 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mettl3Q8C3P7 580 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rhobtb2Q91V93 728 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pcdhga6Q91XY2 932 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mtf2Q02395 593 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ttc9Q3V038 219 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lag3Q61790 521 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gba2Q69ZF3 918 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cfap206Q6PE87 622 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 HnrnplQ8R081 586 aaKnown RBP12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 FggQ8VCM7 436 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 TgdsQ8VDR7 355 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Serpinb9cI7HJI5 387 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Clk3O35492 638 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Usp46P62069 366 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ugt2a2Q6PDD0 528 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cxcl16Q8BSU2 246 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Asz1Q8VD46 475 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pih1d1Q9CQJ2 290 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fkbp9Q9Z247 570 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Adgra3Q7TT36 1310 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 PtgisO35074 501 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hhla1Q3TYV2 514 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Bcl2l1Q64373 233 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ssxb3Q6XAS4 170 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pih1d2Q8CHR9 315 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Snrnp48Q9D361 337 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tbc1d25A1A5B6 742 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 DbiP31786 87 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Znf112Q0VAW7 879 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fam131aQ8BWU3 361 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pcdhb16Q91Y03 802 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Trappc5Q9CQA1 188 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rnf135Q9CWS1 417 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 AglF8VPN4 1532 aa12.06□□□□□ -0.48
Trim56-201ENSMUST00000054384 Magea10A2AMW4 325 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Smok3aC0HKC8 504 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Smok3bC0HKC9 504 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Slc30a1Q60738 503 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tas2r125Q7M710 311 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Snrpb2Q9CQI7 225 aaKnown RBP12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Taf1dQ9D4V4 322 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ttc37F8VPK0 1563 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tnfaip1O70479 316 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ssxb1Q9CPU1 170 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ect2lA0A140LIP2 953 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lcn5A2AJB7 192 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Itga8A2ARA8 1062 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Eno2P17183 434 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Bmp1P98063 991 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mrm3Q5ND52 418 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cdc14aQ6GQT0 603 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dpy19l3Q71B07 716 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tcaf1Q8BNE1 924 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Arhgef10Q8C033 1345 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rb1P13405 921 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ces1cP23953 554 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Epha2Q03145 977 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pydc3Q3V3Q4 588 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Efr3bQ6ZQ18 817 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Atl1Q8BH66 558 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Chtf18Q8BIW9 969 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Lca5lQ8C0X0 741 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Kat5Q8CHK4 513 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Olfr393Q8VGR6 312 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tmem115Q9WUH1 350 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pde8aO88502 823 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Aspscr1Q8VBT9 550 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 HlcsQ920N2 722 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Myh15E9Q264 1925 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Hk1P17710 974 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fosl2P47930 326 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rmdn3Q3UJU9 470 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Kbtbd8Q3UQV5 599 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nfe2l1Q61985 741 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 GnasQ6R0H7 1133 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Dnph1Q80VJ3 173 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Rec114Q9CWH4 259 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Ttyh1Q9D3A9 450 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cul2Q9D4H8 745 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Cntd1Q9D995 334 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Plscr1Q9JJ00 328 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Smok3cA0A087WSF2 504 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Mcpt1P11034 246 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Nckap1P28660 1128 aaKnown RBP12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Atoh1P48985 351 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Idh2P54071 452 aaKnown RBP12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Tars2Q3UQ84 723 aaKnown RBP12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Soat1Q61263 540 aa12.05□□□□□ -0.48
Trim56-201ENSMUST00000054384 Gm35911A0A1D5RLS7 214 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Pnpla5Q32LZ8 432 aa12.04□□□□□ -0.48
Trim56-201ENSMUST00000054384 Fam98aQ3TJZ6 515 aaKnown RBP12.04□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms