RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 LactbQ9EP89 551 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ap4b1Q9WV76 738 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ep400Q8CHI8 3072 aaKnown RBP13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gbp6A0A0G2JDV3 611 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm6685D3YYP3 228 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Zfp963D3Z2T8 383 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 1600015I10RikE9Q745 711 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Socs2O35717 198 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Pde9aO70628 534 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Pgk2P09041 417 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 DesP31001 469 aaKnown RBP13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 SirpaP97797 513 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ebf1Q07802 591 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Nol9Q3TZX8 714 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Fam35aQ3UEN2 891 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rab26Q504M8 260 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Best2Q8BGM5 508 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 TbcelQ8C5W3 424 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Serpina3nQ91WP6 418 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Tcf7l2Q924A0 459 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Hormad1Q9D5T7 392 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 RhojQ9ER71 214 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cyp3a41aQ9JMA7 504 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Cdh22Q9WTP5 813 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rps6ka2Q9WUT3 733 aa13.59□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc4a9E9PUP3 929 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ccdc85cE9Q6B2 420 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Gm8257E9Q8R3 264 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rhox2gL7MUB9 191 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Sema6aO35464 1031 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Sptlc1O35704 473 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Hsd17b7O88736 334 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Sypl2O89104 264 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Csf3rP40223 837 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Prox1P48437 737 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Oaz1P54369 227 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Slc12a1P55014 1095 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 StamP70297 548 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 OxtrP97926 388 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Stt3bQ3TDQ1 823 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Zfp658Q5PPQ4 887 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Ssx9Q6XAS3 170 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 SvopQ8BFT9 548 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Peli3Q8BXR6 445 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Rab36Q8CAM5 267 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Psip1Q99JF8 528 aaKnown RBP13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Mgrn1Q9D074 532 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Lrrc71Q9D3W5 558 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Il21rQ9JHX3 529 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Il20Q9JKV9 176 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 CasrQ9QY96 1079 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Adam17Q9Z0F8 827 aa13.58□□□□□ -0.23
Nup88-201ENSMUST00000035283 Nup210lQ9D2F7 1881 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Vmn1r2A2AMT6 306 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tmem245B1AZA5 876 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ccdc62E9PVD1 701 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Aff2O55112 1272 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 DdcO88533 480 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 PtprcP06800 1291 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Il6raP22272 460 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 FynP39688 537 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 AdslP54822 484 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ncf4P97369 339 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Adra1dP97714 562 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gabpb1Q00420 383 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Slc45a4Q0P5V9 785 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm10392Q3V3I3 114 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Zfp943Q6NZP4 507 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Arl5cQ6P068 179 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sox11Q7M6Y2 395 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ttc34Q8C0Q3 554 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gspt1Q8R050 636 aaKnown RBP13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sgpl1Q8R0X7 568 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rmnd5bQ91YQ7 393 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Slc35b2Q91ZN5 431 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 4921530L21RikQ9CQ47 274 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Nipsnap3bQ9CQE1 247 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cnot11Q9CWN7 505 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 GarsQ9CZD3 729 aaKnown RBP13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ttc25Q9D4B2 624 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Homer2Q9QWW1 354 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Adgra2Q91ZV8 1336 aa13.58□□□□□ -0.24
Nup88-201ENSMUST00000035283 Olfr671A0A1B0GSN5 317 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gjd2O54851 321 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 PenkP22005 268 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rnf157Q3TEL6 685 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Tmem237Q3V0J1 427 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Hspa1aQ61696 641 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Cyp3a13Q64464 503 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Olfr1105Q7TR58 312 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Ankrd45Q810N6 248 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Stx16Q8BVI5 326 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Sfrp1Q8C4U3 314 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Acsf2Q8VCW8 615 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Pard3bQ9CSB4 1203 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Stx12Q9ER00 274 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Rgs1Q9JL25 209 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 CtsmQ9JL96 333 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 Gm6509A0A0J9YUV1 481 aa13.57□□□□□ -0.24
Nup88-201ENSMUST00000035283 A930018M24RikB7ZMY3 218 aa13.57□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms