RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Utp11Q9CZJ1 253 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Zfp655Q9CZP3 541 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 DtnaQ9D2N4 746 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Psmd12Q9D8W5 456 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ap2b1Q9DBG3 937 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gm5415E9PXF3 478 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fam71e2L7N480 754 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Cyp2j6O54750 501 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Got2P05202 430 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pdha1P35486 390 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 GemP55041 295 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Dsc2P55292 902 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tmem207P86045 143 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Zfp956Q3UZY6 572 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 9930111J21Rik1Q5SVP0 844 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Dpy19l3Q71B07 716 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Hmgcll1Q8JZS7 343 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pcdhb18Q91Y02 792 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Dok4Q99KE3 325 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Toe1Q9D2E2 511 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sh2d3cQ9QZS8 854 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ruvbl2Q9WTM5 463 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ep400Q8CHI8 3072 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Zfp985A2A7A5 519 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Vmn2r96E9PZU5 664 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 TubP50586 505 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rab10P61027 200 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Eif4ebp2P70445 120 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sdr16c6Q05A13 316 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Fam83fQ3UKU4 495 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Foxred2Q3USW5 665 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Cldn11Q60771 207 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Map3k7Q62073 579 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Dlx3Q64205 287 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Olfr1198Q7TR12 308 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Prpf38bQ80SY5 542 aaKnown RBP12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rpp38Q80UU2 280 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Cyth4Q80YW0 393 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Clip4Q8CI96 704 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Irak3Q8K4B2 609 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Vmn1r203Q8R273 311 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Retreg3Q9CQV4 466 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tmem135Q9CYV5 458 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 TcimQ9D915 106 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Lrrc46Q9DAP0 323 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tlr6Q9EPW9 795 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 SgshQ9EQ08 502 aa12.87□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pcna-ps2A0A140T8V5 261 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Vmn1r76F8VQ63 324 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gm3138K7N754 218 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ctbp1O88712 441 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 P01740 135 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 PcnaP17918 261 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 KrtdapQ3V2T4 102 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rbm22Q8BHS3 420 aaKnown RBP12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Phtf2Q8CB19 747 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Ppp4r1Q8K2V1 951 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 CtbsQ8R242 366 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Olfr809Q8VEX8 328 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sytl1Q99N80 567 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rwdd4Q9CPR1 188 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Rfc5Q9D0F6 339 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Prorsd1Q9D820 169 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gbp2Q9Z0E6 589 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 4930402K13RikB1AW18 415 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pate1E9Q658 125 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Atp6v1b2P62814 511 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Cage1Q5IR70 849 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Dyrk2Q5U4C9 599 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Usp17laQ61068 526 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 PhgdhQ61753 533 aaKnown RBP12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 RadilQ69Z89 1099 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Znf219Q6IQX8 726 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Tas2r115Q7M719 310 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Cndp1Q8BUG2 492 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Nol6Q8R5K4 1152 aaKnown RBP12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Wnt9aQ8R5M2 365 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Zfp566Q8VCI1 386 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Q922M7 232 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Krcc1Q99JT5 256 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Aco2Q99KI0 780 aaKnown RBP12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Lsm12Q9D0R8 195 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Clca1Q9D7Z6 913 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Q9D9D9 101 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Riok3Q9DBU3 519 aaKnown RBP12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pidd1Q9ERV7 915 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Trpc4Q9QUQ5 974 aa12.86□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Gm9857F7CXR1 130 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Calhm3J3QMI4 347 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Nedd9O35177 833 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 ItgalP24063 1163 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sept4P28661 478 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Pex2P55098 305 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 YwhahP68510 246 aaKnown RBP12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Lmf1Q3U3R4 574 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Krt32Q62168 407 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Q6GQU0 248 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 DstykQ6XUX1 927 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Sel1l3Q80TS8 1137 aa12.85□□□□□ -0.35
Rnf4-201ENSMUST00000030992 Disc1Q811T9 852 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 28.6 ms