RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Pgam1Q9DBJ1 254 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 NvlQ9DBY8 855 aaKnown RBP16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Apobec2Q9WV35 224 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm31371A0A1D5RM70 265 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 NmbrO54799 390 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Il2P04351 169 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pou5f1P20263 352 aaKnown RBP16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Hsfy2Q80Y37 392 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Elmo2Q8BHL5 732 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Lig4Q8BTF7 911 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 PigwQ8C398 503 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Mkl1Q8K4J6 964 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Rnf31Q924T7 1066 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Stk19Q9JHN8 254 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Kcnq2Q9Z351 759 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ighv11-1A0A075B5R6 117 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Slc4a9E9PUP3 929 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sema6aO35464 1031 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Psmc3O88685 442 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 HpcaP84075 193 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Htr4P97288 388 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zbtb48Q1H9T6 681 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tpd52Q62393 224 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 RubcnQ80U62 956 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Mis18bp1Q80WQ8 998 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tmtc3Q8BRH0 920 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Dennd1cQ8CFK6 786 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Acot13Q9CQR4 140 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Serbp1Q9CY58 407 aaKnown RBP16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr1145A2AVC7 325 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Phf11A6H5X4 337 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Slc2a3P32037 493 aaKnown RBP16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Man1a1P45700 655 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 B3gat3P58158 335 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Lrfn1Q2WF71 766 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Slc22a16Q497L8 649 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 XpaQ64267 272 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tmem121Q80XA0 318 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Stk-ps2Q8C0V7 499 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Fbxo48Q8CAT8 161 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gspt1Q8R050 636 aaKnown RBP16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Haus8Q99L00 373 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Kif12Q9D2Z8 642 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Aqp5Q9WTY4 265 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Mki67E9PVX6 3177 aaKnown RBP16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Wdr49A0A0N4SUK7 710 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ifi206G3UZV2 921 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Vmn2r65G3X931 845 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Atoh1P48985 351 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Aarsd1Q3THG9 412 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm4981Q3ULJ8 291 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sema3cQ62181 751 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 CapslQ6P8Y1 208 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Chst10Q6PGK7 356 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr1037Q7TR84 321 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Dnajc16Q80TN4 772 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Fbxw21Q8BI38 468 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sgpl1Q8R0X7 568 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Guca1bQ8VBV8 201 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Mrpl57Q9CQF8 102 aaKnown RBP16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Znf687Q9D2D7 1237 aa16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 Numa1E9Q7G0 2094 aaKnown RBP16.4■□□□□ 0.22
Trim28-201ENSMUST00000005705 ArsaP50428 506 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 PrkciQ62074 595 aaKnown RBP16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc16a9Q7TM99 508 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Serpina3bQ8BYY9 420 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Fuca1Q99LJ1 452 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Kif19Q99PT9 997 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Polr3eQ9CZT4 710 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Tdp2Q9JJX7 370 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Dbn1Q9QXS6 706 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 QkiQ9QYS9 341 aaKnown RBP16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ccdc120A2AEV7 629 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Olfr1160A2AVT0 319 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 UprtB1AVZ0 310 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 C87414E9PWI7 475 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Kcnj6P48542 425 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Atp6v0d1P51863 351 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Arhgap17Q3UIA2 846 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Lsg1Q3UM18 644 aaKnown RBP16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Lrrc47Q505F5 581 aaKnown RBP16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Jak2Q62120 1129 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ppp1r26Q6A025 1163 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Samd4aQ8CBY1 711 aaKnown RBP16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ccdc63Q8CDV6 558 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Ipo11Q8K2V6 975 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Slc36a1Q8K4D3 475 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Gjd3Q91YD1 278 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 TmlheQ91ZE0 421 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Kdm8Q9CXT6 414 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 Chrnb2Q9ERK7 501 aa16.39■□□□□ 0.21
Trim28-201ENSMUST00000005705 4930469K13RikA0A286YDB2 92 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Olfr1022L7MTT3 315 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Timm13P62075 95 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Nfe2Q07279 373 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Sox17Q61473 419 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Mib1Q80SY4 1006 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Hmgxb4Q80Y32 594 aaKnown RBP16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rd3Q8BRE0 195 aa16.38■□□□□ 0.21
Trim28-201ENSMUST00000005705 Rmdn2Q8BSE0 410 aa16.38■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms