RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Bhlhe22Q8C6A8 355 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ubxn2aQ99KJ0 258 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Trim8Q99PJ2 551 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rnft1Q9DCN7 395 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Mbtps1Q9WTZ2 1052 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Btbd19S4R1I0 287 aa18.97■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 P01652 108 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 P01740 135 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Dpep1P31428 410 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Mxd1P50538 227 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Plk2P53351 682 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Q3U4G0 281 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pik3r6Q3U6Q4 756 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Agap2Q3UHD9 1186 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Zcchc14Q8VIG0 956 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 DeraQ91YP3 318 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Abcg3Q99P81 650 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Chit1Q9D7Q1 464 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Paqr5Q9DCU0 330 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Sept6Q9R1T4 434 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tle2Q9WVB2 767 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pappa2E9PZ87 1789 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm28168A0A087WNP1 180 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Olfr1049A2ARZ0 308 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm3173A6NAS3 172 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Erich2E9Q1A6 463 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm3020E9Q3J7 150 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm21293E9Q4G9 266 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm2897K7N6T7 172 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 P01673 111 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tlx1P43345 332 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Adrbk2Q3UYH7 688 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Glp2rQ5IXF8 512 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Pde1aQ61481 565 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Zfp512bQ6PHP4 879 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Cops7bQ8BV13 264 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Tbc1d17Q8BYH7 645 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Kcnv1Q8BZN2 503 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm3411Q8C7R2 150 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gtse1Q8R080 741 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 GneQ91WG8 722 aaKnown RBP18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 CtsqQ91ZF4 343 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Fuca1Q99LJ1 452 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Upk1aQ9D132 257 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ten1Q9D7K2 161 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ddx59Q9DBN9 619 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Rab27aQ9ERI2 221 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Chrnb2Q9ERK7 501 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Ppp2r3cQ9JK24 453 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Arih2Q9Z1K6 492 aa18.96■□□□□ 0.63
Shkbp1-201ENSMUST00000003857 Gm5485A0A1D5RM98 91 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Zfp358E9Q8M1 571 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 NmbrO54799 390 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Mllt10O54826 1068 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 PdgfrbP05622 1098 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Mc1rQ01727 315 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Coq10bQ3THF9 240 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Olfr798Q7TRH8 311 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Dhx33Q80VY9 698 aaKnown RBP18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Arhgap11aQ80Y19 987 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 PvrQ8K094 408 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Cys1Q8R4T1 145 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Atpaf2Q91YY4 289 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Dok4Q99KE3 325 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Bcas2Q9D287 225 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ifrd2Q9D8U0 441 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Klhl32A2AJX0 620 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Rhox3fA2ANE1 215 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Gm3259D3YUK0 475 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Mup5P11591 180 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 CcnfP51944 777 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Atp5jP97450 108 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Fam171bQ14CH0 825 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Q5XFZ0 217 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Smarcd1Q61466 515 aaKnown RBP18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Rnf220Q6PDX6 566 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Smndc1Q8BGT7 238 aaKnown RBP18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Osbpl6Q8BXR9 959 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Slc46a2Q8CA03 479 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Lrrc4Q99PH1 652 aa18.95■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Gm13276A0A087WR18 182 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Vmn2r74E9PW21 853 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Pde9aO70628 534 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Gnao1P18872 354 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ptpn1P35821 432 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Alox15P39654 663 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ano7Q14AT5 859 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Fam35aQ3UEN2 891 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Mthfd1lQ3V3R1 977 aaKnown RBP18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ric8bQ80XE1 520 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 LppQ8BFW7 613 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Suds3Q8BR65 328 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Trim35Q8C006 501 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Tmem154Q8C4Q9 181 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Ppp4r1Q8K2V1 951 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Adgrg3Q8R0T6 542 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Zfp65Q91W94 390 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Mat2bQ99LB6 334 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 Coro1cQ9WUM4 474 aa18.94■□□□□ 0.62
Shkbp1-201ENSMUST00000003857 ApipQ9WVQ5 241 aa18.94■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms