RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 SH3RF2Q8TEC5 729 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 GDPD5Q8WTR4 605 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 UPF1Q92900 1129 aaKnown RBP eCLIP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 PARK7Q99497 189 aaKnown RBP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 ILKAPQ9H0C8 392 aaPredicted RBP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 STN1Q9H668 368 aaKnown RBP17.07■□□□□ 0.32
PHGDH-223ENST00000641597 CYP4F12Q9HCS2 524 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 PCDHGB4Q9UN71 923 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 PCDHGB5Q9Y5G0 923 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 AK5Q9Y6K8 562 aa17.07■□□□□ 0.32
PHGDH-223ENST00000641597 TIMM44O43615 452 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 MGEA5O60502 916 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 SLC1A2P43004 574 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 CDK7P50613 346 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 PLK1P53350 603 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 BTKQ06187 659 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 MAP2K5Q13163 448 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 SEPT6Q14141 434 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 PCBP1Q15365 356 aaKnown RBP eCLIP17.06■□□□□ 0.322e-6■■■□□ 14.6
PHGDH-223ENST00000641597 TRIP10Q15642 601 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 MORN1Q5T089 497 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 RBM20Q5T481 1227 aaKnown RBP17.06■□□□□ 0.32
PHGDH-223ENST00000641597 PM20D1Q6GTS8 502 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 LDB1Q86U70 411 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-223ENST00000641597 RCN3Q96D15 328 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 GPAMQ9HCL2 828 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 PAGE1O75459 146 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 HLA-DQB2P05538 268 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 TCN1P20061 433 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-223ENST00000641597 KCNA5P22460 613 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 LHX1P48742 406 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 HCAR3P49019 387 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 THOP1P52888 689 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 MAXP61244 160 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 UPP1Q16831 310 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 ITPRIPL1Q6GPH6 555 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 GDF6Q6KF10 455 aaPredicted RBP17.06■□□□□ 0.32
PHGDH-223ENST00000641597 C14orf80Q86SX3 495 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 CASP10Q92851 521 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 TRHDEQ9UKU6 1024 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 ARHGAP26Q9UNA1 814 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 ASB3Q9Y575 518 aa17.06■□□□□ 0.32
PHGDH-223ENST00000641597 NCAM2O15394 837 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 GJB3O75712 270 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 GNAT1P11488 350 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 XRCC1P18887 633 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-223ENST00000641597 NPY2RP49146 381 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 CSRP3P50461 194 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 RPL14P50914 215 aaKnown RBP17.05■□□□□ 0.32
PHGDH-223ENST00000641597 TAS2R39P59534 338 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 ARTNQ5T4W7 220 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 SPRYD7Q5W111 196 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 ZNF470Q6ECI4 717 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 ZYG11AQ6WRX3 759 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 ZNF483Q8TF39 744 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-223ENST00000641597 PGAP3Q96FM1 320 aaPredicted RBP17.05■□□□□ 0.32
PHGDH-223ENST00000641597 GPR78Q96P69 363 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 TBL1YQ9BQ87 522 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 KIFC1Q9BW19 673 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 TRPV6Q9H1D0 765 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 RHOJQ9H4E5 214 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 MAFKO60675 156 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 MT-CO1P00395 513 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 HDCP19113 662 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 MTTPP55157 894 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 MRPS6P82932 125 aaKnown RBP17.05■□□□□ 0.32
PHGDH-223ENST00000641597 IHHQ14623 411 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 LIPMQ5VYY2 423 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 SEL1L3Q68CR1 1132 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 NAPEPLDQ6IQ20 393 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 CNSTQ6PJW8 725 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 PDSS2Q86YH6 399 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 ATPAF2Q8N5M1 289 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 CDRT15Q96T59 188 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 DRC3Q9H069 523 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 AP5M1Q9H0R1 490 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 CHST12Q9NRB3 414 aa17.05■□□□□ 0.32
PHGDH-223ENST00000641597 NYNRINQ9P2P1 1898 aaKnown RBP17.05■□□□□ 0.32
PHGDH-223ENST00000641597 FAM95CA0A1B0GW59 222 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 MAGEA13PA6NCF6 341 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 CAPN8A6NHC0 703 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 TARM1B6A8C7 271 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 HDAC3O15379 428 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 FKBP6O75344 327 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 ATP5BP06576 529 aaKnown RBP17.04■□□□□ 0.32
PHGDH-223ENST00000641597 ENO3P13929 434 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-223ENST00000641597 TSPAN8P19075 237 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 ARCN1P48444 511 aaKnown RBP17.04■□□□□ 0.32
PHGDH-223ENST00000641597 CPT1AP50416 773 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 MS4A2Q01362 244 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 LRRC8EQ6NSJ5 796 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 PKN3Q6P5Z2 889 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 FBXL19Q6PCT2 694 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 TFAP2DQ7Z6R9 452 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 TXNDC5Q8NBS9 432 aaKnown RBP17.04■□□□□ 0.32
PHGDH-223ENST00000641597 FCRL2Q96LA5 508 aaPredicted RBP17.04■□□□□ 0.32
PHGDH-223ENST00000641597 NPAS2Q99743 824 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 VCXQ9H320 206 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 CDH9Q9ULB4 789 aa17.04■□□□□ 0.32
PHGDH-223ENST00000641597 CSE1LP55060 971 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms