RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 RANBP10Q6VN20 620 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ARHGAP36Q6ZRI8 547 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 CAPN12Q6ZSI9 719 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 LCA5Q86VQ0 697 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 IGDCC3Q8IVU1 814 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 SRRM1Q8IYB3 904 aaKnown RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 PPM1NQ8N819 430 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 DCAF4L2Q8NA75 395 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 IPMKQ8NFU5 416 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 USP33Q8TEY7 942 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ATP2A3Q93084 1043 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 TADA1Q96BN2 335 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 OXNAD1Q96HP4 312 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 FEM1CQ96JP0 617 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 PRICKLE1Q96MT3 831 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 SRPK1Q96SB4 655 aaKnown RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 GORASP1Q9BQQ3 440 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 CORO1BQ9BR76 489 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 C2orf49Q9BVC5 232 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 CEP41Q9BYV8 373 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 MUC3BQ9H195 1237 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ATP13A1Q9HD20 1204 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ALG13Q9NP73 1137 aaKnown RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 KCNK9Q9NPC2 374 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 GKN1Q9NS71 199 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 DZANK1Q9NVP4 752 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 SYBUQ9NX95 663 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 KIAA1522Q9P206 1035 aaPredicted RBP9.87□□□□□ -0.83
PHGDH-215ENST00000641371 ZFATQ9P243 1243 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 TBK1Q9UHD2 729 aa9.87□□□□□ -0.83
PHGDH-215ENST00000641371 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 GOLGA6L7A0A1B0GV03 622 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 LCHNA4D1U4 455 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 GMNCA6NCL1 334 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 J3KR12 359 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 TIMM44O43615 452 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 TBL1XO60907 577 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 CLASP2O75122 1294 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 FAM107AO95990 144 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 MYL4P12829 197 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 SYN1P17600 705 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 DNAJB1P25685 340 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 HOXD9P28356 352 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 SPRP35270 261 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 SERPINH1P50454 418 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 RPS24P62847 133 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 PDE1BQ01064 536 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 SLC18A2Q05940 514 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 NIPAL4Q0D2K0 466 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 GPM6BQ13491 265 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 DMC1Q14565 340 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 UBAP2Q5T6F2 1119 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 GPR158Q5T848 1215 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 FYB2Q5VWT5 728 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 RNF43Q68DV7 783 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 TXNDC8Q6A555 127 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 KIAA0930Q6ICG6 404 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 RFWD3Q6PCD5 774 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 KDELC1Q6UW63 502 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 KIAA0408Q6ZU52 694 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 OTOP3Q7RTS5 596 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 CCDC91Q7Z6B0 441 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 GALNT7Q86SF2 657 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 TRIM42Q8IWZ5 723 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 CMTM8Q8IZV2 173 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 MAB21L3Q8N8X9 362 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 TDRD5Q8NAT2 981 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 SLC22A17Q8WUG5 538 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 LRRN4Q8WUT4 740 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 ATXN2LQ8WWM7 1075 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 SPOCK2Q92563 424 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 ZNF669Q96BR6 464 aaPredicted RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 IFT43Q96FT9 208 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 MRGPRX2Q96LB1 330 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 C19orf43Q9BQ61 176 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 C17orf80Q9BSJ5 609 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 FAM167BQ9BTA0 163 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 FICDQ9BVA6 458 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 IQCGQ9H095 443 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 PPANQ9NQ55 473 aaKnown RBP9.86□□□□□ -0.83
PHGDH-215ENST00000641371 SMPD4Q9NXE4 827 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 CTNNAL1Q9UBT7 734 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 MSRAQ9UJ68 235 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 TCAF1Q9Y4C2 921 aa9.86□□□□□ -0.83
PHGDH-215ENST00000641371 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-215ENST00000641371 LOC285095A0A1B0GVY8 99 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-215ENST00000641371 A0A1W2PRU2 124 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 HIDE1A8MVS5 230 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 LEFTY2O00292 366 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 CCL16O15467 120 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 GREM1O60565 184 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 C1QAP02745 245 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 RHOP08100 348 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 SPATA31D3P0C874 917 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 HOXB8P17481 243 aaPredicted RBP9.85□□□□□ -0.83
PHGDH-215ENST00000641371 CCNFP41002 786 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 GRIA1P42261 906 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 PLK1P53350 603 aa9.85□□□□□ -0.83
PHGDH-215ENST00000641371 CYP4F8P98187 520 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms