RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 B3GALT6Q96L58 329 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 OXCT2Q9BYC2 517 aaPredicted RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 ZYG11BQ9C0D3 744 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TREX1Q9NSU2 369 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TLK1Q9UKI8 766 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 FAM92AA1XBS5 289 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TRIM13O60858 407 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 SOAT2O75908 522 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 CNTN5O94779 1100 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TBX18O95935 607 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 RHOQP17081 205 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 SAT1P21673 171 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 CHRNA4P43681 627 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 CCNG1P51959 295 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 MPP1Q00013 466 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 PSMD5Q16401 504 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 UGP2Q16851 508 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 KHDC1Q4VXA5 237 aaKnown RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 ALFQ53S48 1182 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TLDC1Q6P9B6 456 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 KDELC1Q6UW63 502 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TMEM151AQ8N4L1 468 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 RBM15BQ8NDT2 890 aaKnown RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 HMCESQ96FZ2 354 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TSEN34Q9BSV6 310 aaKnown RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 FTHL17Q9BXU8 183 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 GPR62Q9BZJ7 368 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 SLC25A51Q9H1U9 297 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TMEM248Q9NWD8 314 aa17.3■□□□□ 0.36
PHGDH-211ENST00000641213 CPSF2Q9P2I0 782 aaKnown RBP17.3■□□□□ 0.36
PHGDH-211ENST00000641213 TMEM114B3SHH9 223 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 J3KR12 359 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 PHGDHO43175 533 aaKnown RBP17.29■□□□□ 0.36
PHGDH-211ENST00000641213 SIN3BO75182 1162 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 APOA4P06727 396 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 SLC35E2BP0CK96 405 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 AOC1P19801 751 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 YWHAQP27348 245 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 PGM1P36871 562 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 WNT3AP56704 352 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 HNRNPDQ14103 355 aaKnown RBP17.29■□□□□ 0.36
PHGDH-211ENST00000641213 CNGA3Q16281 694 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 SLC41A1Q8IVJ1 513 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 TET1Q8NFU7 2136 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 FBXO32Q969P5 355 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 TACO1Q9BSH4 297 aaKnown RBP17.29■□□□□ 0.36
PHGDH-211ENST00000641213 TASP1Q9H6P5 420 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 OXSMQ9NWU1 459 aa17.29■□□□□ 0.36
PHGDH-211ENST00000641213 H0Y3Z8 333 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 HSPA4LO95757 839 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 LMNAP02545 664 aaKnown RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 SBK3P0C264 359 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 HAPLN1P10915 354 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 COL6A1P12109 1028 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 AVPR1AP37288 418 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 RENBPP51606 427 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 ARPP19P56211 112 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 SLC12A1Q13621 1099 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 PCSK7Q16549 785 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 VWA5B1Q5TIE3 1220 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 ZNF280DQ6N043 979 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 ZNF781Q8N8C0 355 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 ATP6V0D2Q8N8Y2 350 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 CD99L2Q8TCZ2 262 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 SREK1Q8WXA9 508 aaKnown RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 FATE1Q969F0 183 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 IMP4Q96G21 291 aaKnown RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 ACE2Q9BYF1 805 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.28■□□□□ 0.365e-8■■□□□ 14.4
PHGDH-211ENST00000641213 DCLRE1BQ9H816 532 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 NT5MQ9NPB1 228 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 STARD7Q9NQZ5 370 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 CLIC5Q9NZA1 410 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 PLA2G4CQ9UP65 541 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 CHD5Q8TDI0 1954 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 IGLV3-10A0A075B6K4 115 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 OR6C75A6NL08 312 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 TK2O00142 265 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 MAGEC1O60732 1142 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 H2AFYO75367 372 aaKnown RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 SLC1A2P43004 574 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 SLC10A7Q0GE19 358 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 USP4Q13107 963 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 KPNB1Q14974 876 aaKnown RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 TRIP4Q15650 581 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 LHX8Q68G74 356 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 KIAA0930Q6ICG6 404 aaPredicted RBP17.28■□□□□ 0.36
PHGDH-211ENST00000641213 LRRC8DQ7L1W4 858 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 LCA5Q86VQ0 697 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 MIB1Q86YT6 1006 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 MFSD6LQ8IWD5 586 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 ARHGAP24Q8N264 748 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 RDH11Q8TC12 318 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 KCNV2Q8TDN2 545 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 WDR60Q8WVS4 1066 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 IGSF8Q969P0 613 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 BTN2A3PQ96KV6 586 aa17.28■□□□□ 0.36
PHGDH-211ENST00000641213 GATA5Q9BWX5 397 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms