RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, human

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-222	ENST00000640072	TRAF7	Q6Q0C0	670 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	STOX1	Q6ZVD7	989 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TTC7B	Q86TV6	843 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ZNF410	Q86VK4	478 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	FANCB	Q8NB91	859 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TMEM40	Q8WWA1	233 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GATAD2B	Q8WXI9	593 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TARS2	Q9BW92	718 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MKRN2	Q9H000	416 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CCDC134	Q9H6E4	229 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SPON1	Q9HCB6	807 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SLC38A7	Q9NVC3	462 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CFAP97	Q9P2B7	532 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	REXO2	Q9Y3B8	237 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MYH13	Q9UKX3	1938 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MAGI2	Q86UL8	1455 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	EVPLL	A8MZ36	301 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072		H0YGN5	161 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	B4GAT1	O43505	415 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CSTA	P01040	98 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ASGR2	P07307	311 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	RNF224	P0DH78	156 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CDH2	P19022	906 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CYP3A5	P20815	502 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CASP1	P29466	404 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	EEF1D	P29692	281 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MAGEA11	P43364	429 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	EHHADH	Q08426	723 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PCGF3	Q3KNV8	242 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	RABGAP1L	Q5R372	815 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GTF2IRD2B	Q6EKJ0	949 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CENPP	Q6IPU0	288 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ATG14	Q6ZNE5	492 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ZNF765	Q7L2R6	523 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ARMCX2	Q7L311	632 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GTF2IRD2	Q86UP8	949 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	COL23A1	Q86Y22	540 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CPA6	Q8N4T0	437 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TSPYL6	Q8N831	410 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GALNT11	Q8NCW6	608 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	HTRA1	Q92743	480 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	WRNIP1	Q96S55	665 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	C6orf62	Q9GZU0	229 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	UNC93B1	Q9H1C4	597 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GDAP2	Q9NXN4	497 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TAS2R3	Q9NYW6	316 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TINAG	Q9UJW2	476 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PCDHA12	Q9UN75	941 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SSUH2	Q9Y2M2	353 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	NFS1	Q9Y697	457 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	C2orf74	A8MZ97	194 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	hCG_2039718	K7EN88	272 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SOCS7	O14512	581 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ZBTB24	O43167	697 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PPP6R2	O75170	966 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	RHOBTB1	O94844	696 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MB	P02144	154 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	NPR3	P17342	541 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CXCR2	P25025	360 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	RPA1	P27694	616 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	NAMPT	P43490	491 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CDK9	P50750	372 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ERVK-9	P63128	1117 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	DLG4	P78352	724 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	LRRC63	Q05C16	580 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	DPYD	Q12882	1025 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	SSX2	Q16385	188 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	RNF219	Q5W0B1	726 aa	Predicted RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	DUPD1	Q68J44	220 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CYB5R2	Q6BCY4	276 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	DTHD1	Q6ZMT9	781 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MSANTD1	Q6ZTZ1	278 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	ADGRG6	Q86SQ4	1221 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MCEMP1	Q8IX19	187 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	KLHL36	Q8N4N3	616 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	UBL4B	Q8N7F7	174 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	HIPK4	Q8NE63	616 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GRPEL2	Q8TAA5	225 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	FIG4	Q92562	907 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	VPS33A	Q96AX1	596 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MTBP	Q96DY7	904 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PGM2	Q96G03	612 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PPP1R2P1	Q96PQ5	205 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	GCNA	Q96QF7	691 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	CADM1	Q9BY67	442 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	NFKBIZ	Q9BYH8	718 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	TRIT1	Q9H3H1	467 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	MCCC2	Q9HCC0	563 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	NCKIPSD	Q9NZQ3	722 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	DNAJB9	Q9UBS3	223 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	DBR1	Q9UK59	544 aa	Known RBP	6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	USP31	Q70CQ4	1352 aa		6.23	□□□□□ -1.41
NECAP1-222	ENST00000640072	PVALEF	A0A1B0GWK0	134 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	GSC2	O15499	205 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	NDUFA2	O43678	99 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	PLA2G6	O60733	806 aa		6.22	□□□□□ -1.41
NECAP1-222	ENST00000640072	FAM58BP	P0C7Q3	252 aa		6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms