RNA–Protein interactions for RNA: ENST00000638120.1

CACNA1D-228, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 2 BASIC

Gene CACNA1D, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-228ENST00000638120 LRRC3Q9BY71 257 aa12.44□□□□□ -0.42
CACNA1D-228ENST00000638120 ATP13A1Q9HD20 1204 aa12.44□□□□□ -0.42
CACNA1D-228ENST00000638120 IL1RAPL1Q9NZN1 696 aa12.44□□□□□ -0.42
CACNA1D-228ENST00000638120 GRID1Q9ULK0 1009 aa12.44□□□□□ -0.42
CACNA1D-228ENST00000638120 PSAT1Q9Y617 370 aa12.44□□□□□ -0.42
CACNA1D-228ENST00000638120 SLC4A7Q9Y6M7 1214 aa12.44□□□□□ -0.42
CACNA1D-228ENST00000638120 MIA3Q5JRA6 1907 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 ILVBLA1L0T0 632 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 TLL1O43897 1013 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 GREM1O60565 184 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 RHOCP08134 193 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 ALADP13716 330 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 TAC1P20366 129 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 NMBRP28336 390 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 FOXN2P32314 431 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 CTNNB1P35222 781 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 BMPR1AP36894 532 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 GP5P40197 560 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 CD86P42081 329 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 ITKQ08881 620 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 ZNF235Q14590 738 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 PCSK7Q16549 785 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 ARMC3Q5W041 872 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 PKN3Q6P5Z2 889 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 POTEHQ6S545 545 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 Q6ZNB5 142 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 RGS9BPQ6ZS82 235 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 GAREM2Q75VX8 874 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 SETD3Q86TU7 594 aaPredicted RBP12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 KREMEN2Q8NCW0 462 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 MRPS31Q92665 395 aaKnown RBP12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 SEC16BQ96JE7 1060 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 CYP2S1Q96SQ9 504 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 POLR1EQ9GZS1 481 aaKnown RBP12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 MCOLN1Q9GZU1 580 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 ARNT2Q9HBZ2 717 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 MRM3Q9HC36 420 aaKnown RBP12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 GGA2Q9UJY4 613 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 TCAF1Q9Y4C2 921 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 CPQQ9Y646 472 aa12.43□□□□□ -0.42
CACNA1D-228ENST00000638120 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 COPEO14579 308 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 GLUD1P00367 558 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 HDCP19113 662 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ADRA1DP25100 572 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ETFBP38117 255 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ETV4P43268 484 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 CHRNA4P43681 627 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ERVFC1P60507 584 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 CYP4F8P98187 520 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ZNF177Q13360 481 aaPredicted RBP12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 POU6F1Q14863 301 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 SEPT7Q16181 437 aaKnown RBP12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 IL31Q6EBC2 164 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ALG1LQ6GMV1 187 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 KCNMB4Q86W47 210 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 SPATS2Q86XZ4 545 aaKnown RBP12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 HS6ST3Q8IZP7 471 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 CACNA2D3Q8IZS8 1091 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 PPHLN1Q8NEY8 458 aaKnown RBP12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ZNF778Q96MU6 729 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 ALG13Q9NP73 1137 aaKnown RBP12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 FGFR1OP2Q9NVK5 253 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 TXNDC16Q9P2K2 825 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 SLC17A7Q9P2U7 560 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 PRKAG3Q9UGI9 489 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 TBC1D30Q9Y2I9 924 aa12.42□□□□□ -0.42
CACNA1D-228ENST00000638120 C2orf71A6NGG8 1288 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 GFRA2O00451 464 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 MUSKO15146 869 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 KDELR3O43731 214 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 TSPAN3O60637 253 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ITGA2BP08514 1039 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 DHRS4L1P0CG22 281 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 CDC25CP30307 473 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 OXCT1P55809 520 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ZXDBP98169 803 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 IHHQ14623 411 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 SMAD1Q15797 465 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 TEDDM1Q5T9Z0 273 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 GRTP1Q5TC63 336 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 PLPP4Q5VZY2 271 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 PDPK2PQ6A1A2 396 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 CXorf57Q6NSI4 855 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 PIGWQ7Z7B1 504 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 FAM217AQ8IXS0 508 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ELMOD1Q8N336 334 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 BBS5Q8N3I7 341 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ACMSDQ8TDX5 336 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 MGME1Q9BQP7 344 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ACE2Q9BYF1 805 aaPredicted RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ATXN3LQ9H3M9 355 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 HAUS2Q9NVX0 235 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 HIDE1A8MVS5 230 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ALDOAP04075 364 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 CSE1LP55060 971 aaKnown RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 SLC7A9P82251 487 aa12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 RFTN1Q14699 578 aaPredicted RBP12.41□□□□□ -0.42
CACNA1D-228ENST00000638120 ZKSCAN8Q15776 578 aaPredicted RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms