RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 TBC1D3EA0A087X179 549 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3KA0A087X1G2 549 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 FAM149AA5PLN7 773 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3FA6NER0 549 aaPredicted RBP18.75■□□□□ 0.59
CLN6-214ENST00000636314 TRABD2BA6NFA1 517 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3LB9A6J9 549 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 KPNA3O00505 521 aaPredicted RBP18.75■□□□□ 0.59
CLN6-214ENST00000636314 DDX3XO00571 662 aaKnown RBP eCLIP18.75■□□□□ 0.592e-13■■■□□ 16.8
CLN6-214ENST00000636314 RAMP2O60895 175 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 RTN2O75298 545 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 ZMPSTE24O75844 475 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 PRNPP04156 253 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3HP0C7X1 549 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 GZMAP12544 262 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 SKILP12757 684 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 PSMA2P25787 234 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 EPHB2P29323 1055 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 L1CAMP32004 1257 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 CHRNA3P32297 505 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 ACVRL1P37023 503 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 CCR5P51681 352 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 RACK1P63244 317 aaKnown RBP18.75■□□□□ 0.59
CLN6-214ENST00000636314 OGDHQ02218 1023 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 SLC20A2Q08357 652 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 CNTN1Q12860 1018 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 AGBL4Q5VU57 503 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3GQ6DHY5 549 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3CQ6IPX1 549 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 PLEKHA7Q6IQ23 1121 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 DNAAF5Q86Y56 855 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 TBC1D3Q8IZP1 549 aaPredicted RBP18.75■□□□□ 0.59
CLN6-214ENST00000636314 PYROXD2Q8N2H3 581 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 GRIN3AQ8TCU5 1115 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 FAM131CQ96AQ9 280 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 ZNF653Q96CK0 615 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 SLC6A18Q96N87 628 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 EPAS1Q99814 870 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 ACE2Q9BYF1 805 aaPredicted RBP18.75■□□□□ 0.59
CLN6-214ENST00000636314 CEP44Q9C0F1 390 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 MAGEH1Q9H213 219 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 KDM4CQ9H3R0 1056 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 DYRK4Q9NR20 520 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 FZD10Q9ULW2 581 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 HPCAL4Q9UM19 191 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 ANKRD6Q9Y2G4 727 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 BPTFQ12830 3046 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 SHROOM3Q8TF72 1996 aa18.75■□□□□ 0.59
CLN6-214ENST00000636314 A0A1W2PQJ5 194 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 KCNK3O14649 394 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 PLRG1O43660 514 aaKnown RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 CREB3O43889 395 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 DKK1O94907 266 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 FTLP02792 175 aaPredicted RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 CTSLP07711 333 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 PBX1P40424 430 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 CCT8P50990 548 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 GEMIN4P57678 1058 aaKnown RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 PPP2CBP62714 309 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 PPP2CAP67775 309 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 PCDH20Q8N6Y1 951 aaKnown RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 RTL3Q8N8U3 475 aaKnown RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 CHST14Q8NCH0 376 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 ARHGEF2Q92974 986 aaKnown RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 IQCDQ96DY2 449 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 TRIM11Q96F44 468 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 AASDHPPTQ9NRN7 309 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 DKK4Q9UBT3 224 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 CNOT8Q9UFF9 292 aaKnown RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 IL36AQ9UHA7 158 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 FCF1Q9Y324 198 aaKnown RBP18.74■□□□□ 0.59
CLN6-214ENST00000636314 SCINQ9Y6U3 715 aa18.74■□□□□ 0.59
CLN6-214ENST00000636314 CXorf51AA0A1B0GTR3 108 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 TNFSF14O43557 240 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 GRK6P43250 576 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 DNA2P51530 1060 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 C21orf59P57076 290 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 CCDC15Q0P6D6 951 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 POLD3Q15054 466 aaPredicted RBP18.73■□□□□ 0.59
CLN6-214ENST00000636314 DPY19L3Q6ZPD9 716 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 VPS36Q86VN1 386 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 ZNF354CQ86Y25 554 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 TMIEQ8NEW7 156 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 SKA1Q96BD8 255 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 PPP1R16AQ96I34 528 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 BBC3Q96PG8 261 aaPredicted RBP18.73■□□□□ 0.59
CLN6-214ENST00000636314 CATSPERBQ9H7T0 1116 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 EBF2Q9HAK2 575 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 IFNKQ9P0W0 207 aa18.73■□□□□ 0.59
CLN6-214ENST00000636314 C10orf142B7Z368 130 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 TPM3P06753 285 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 MYBL1P10243 752 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 ZBED6P86452 979 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 IL9RQ01113 521 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 PRPF39Q86UA1 669 aaKnown RBP18.72■□□□□ 0.59
CLN6-214ENST00000636314 ARRDC3Q96B67 414 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 SERAC1Q96JX3 654 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.72■□□□□ 0.59
CLN6-214ENST00000636314 TM6SF2Q9BZW4 377 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 PREBQ9HCU5 417 aa18.72■□□□□ 0.59
CLN6-214ENST00000636314 MYO1AQ9UBC5 1043 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms