RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 FBXO40Q9UH90 709 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 FAF1Q9UNN5 650 aaPredicted RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 AKAP2Q9Y2D5 859 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ATG4BQ9Y4P1 393 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PCDHA3Q9Y5H8 950 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SPO11Q9Y5K1 396 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 FHOD1Q9Y613 1164 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SIRT4Q9Y6E7 314 aaPredicted RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 TDRD15B5MCY1 1934 aaKnown RBP-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 PKD1L1Q8TDX9 2849 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ADGRF5Q8IZF2 1346 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 IGSF9BQ9UPX0 1349 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 SPATA31D1Q6ZQQ2 1576 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 VPS13DQ5THJ4 4388 aa-0.96□□□□□ -2.56
CDKL5-210ENST00000636046 ABCA12Q86UK0 2595 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ATRQ13535 2644 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ANK3Q12955 4377 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 IGKV1-27A0A075B6S5 117 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 KLF18A0A0U1RQI7 1052 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 A0A1W2PNN7 141 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 MEX3AA1L020 520 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF320A2RRD8 509 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 FAM90A27PA6NNH2 459 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 RHPN2P1A8MT19 583 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 VGLL3A8MV65 326 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 A8MV72 311 aaPredicted RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 G3V4G9 280 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 I6L893 689 aaPredicted RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 EEF2KO00418 725 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ENC1O14682 589 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TNFSF11O14788 317 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 NUPL2O15504 423 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 IDH3BO43837 385 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ZIC3O60481 467 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 GALR3O60755 368 aaPredicted RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ICOSLGO75144 302 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 GADD45BO75293 160 aaPredicted RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 KRT37O76014 449 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM63AO94886 807 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 GLSO94925 669 aaPredicted RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 LARGE1O95461 756 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PMS2P2O95744 297 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 MPIG6BO95866 241 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PDGFAP04085 211 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 XRCC5P13010 732 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 MAGP20916 626 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 CDK11BP21127 795 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 GARTP22102 1010 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 CDH3P22223 829 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 MCM3P25205 808 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TACR3P29371 465 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 SPRR2BP35325 72 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TGFBR1P36897 503 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 IL15P40933 162 aaPredicted RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 UBA7P41226 1012 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 CRKP46108 304 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 NSFP46459 744 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 LMAN1P49257 510 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 FNTBP49356 437 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 AARSP49588 968 aaKnown RBP eCLIP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 EMDP50402 254 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 HK3P52790 923 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 SEC13P55735 322 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 STX17P56962 302 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 CLRN1P58418 232 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PITX1P78337 314 aaPredicted RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ARHGAP4P98171 946 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 SLC20A2Q08357 652 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 NSUN2Q08J23 767 aaKnown RBP eCLIP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 SLC39A6Q13433 755 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 LPIN1Q14693 890 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PPP2R5DQ14738 602 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PRSS8Q16651 343 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF284Q2VY69 593 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TOR1AIP1Q5JTV8 583 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 CC2D1BQ5T0F9 858 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 L1TD1Q5T7N2 865 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 DEPDC1Q5TB30 811 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 MARC1Q5VT66 337 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 DCAF12L2Q5VW00 463 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PCNX4Q63HM2 1172 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 KCTD11Q693B1 232 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM65Q6PI78 240 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 RBM44Q6ZP01 1051 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 SLC16A12Q6ZSM3 486 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 KCTD1Q719H9 257 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 FASTKD5Q7L8L6 764 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 OLIG3Q7RTU3 272 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 NEGR1Q7Z3B1 354 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 UBE3BQ7Z3V4 1068 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 KRT27Q7Z3Y8 459 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 BCDIN3DQ7Z5W3 292 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TRPT1Q86TN4 253 aaKnown RBP-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 IGFN1Q86VF2 1251 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 SFR1Q86XK3 245 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PALB2Q86YC2 1186 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 PDSS2Q86YH6 399 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 TMEM139Q8IV31 216 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 ZNF695Q8IW36 515 aa-0.97□□□□□ -2.56
CDKL5-210ENST00000636046 LAX1Q8IWV1 398 aa-0.97□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms