RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DNAJB2P25686 324 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 CCR10P46092 362 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 ENTPD1P49961 510 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 SLC26A2P50443 739 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 GTF2A2P52657 109 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 BCAT1P54687 386 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 LRP8Q14114 963 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 GRM3Q14832 879 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 LRRC8EQ6NSJ5 796 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 CHSY3Q70JA7 882 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 PIWIL4Q7Z3Z4 852 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 UNC93AQ86WB7 457 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 FSTL5Q8N475 847 aaPredicted RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 PCDH20Q8N6Y1 951 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 TFAP2CQ92754 450 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 MFSD3Q96ES6 412 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 SLC29A1Q99808 456 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 CIB1Q99828 191 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 FTHL17Q9BXU8 183 aa15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 IARS2Q9NSE4 1012 aaKnown RBP15.01□□□□□ -0.01
CACNA1A-220ENST00000635988 JUNP05412 331 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 GJB1P08034 283 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 MATKP42679 507 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 ABCG1P45844 678 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 STT3AP46977 705 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 RPL34P49207 117 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 ZBTB17Q13105 803 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 UGP2Q16851 508 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 MEX3CQ5U5Q3 659 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 GK5Q6ZS86 529 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 ZC3HC1Q86WB0 502 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 FAM131BQ86XD5 332 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 LZTR1Q8N653 840 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 MFSD2AQ8NA29 543 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 FAM47BQ8NA70 645 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF420Q8TAQ5 688 aaPredicted RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 CLEC4CQ8WTT0 213 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 SLCO4A1Q96BD0 722 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 PPWD1Q96BP3 646 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 GPR20Q99678 358 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 MRPL45Q9BRJ2 306 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 PCDHAC1Q9H158 963 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 ARMC1Q9NVT9 282 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 CACNA2D2Q9NY47 1150 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 ACOT9Q9Y305 439 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 HES2Q9Y543 173 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 LCTP09848 1927 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 MYO18AQ92614 2054 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 NCAM2O15394 837 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 MTSS1O43312 755 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 DLX3O60479 287 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 IQCF3P0C7M6 154 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 IDO1P14902 403 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 PORP16435 677 aaPredicted RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 KPNA2P52292 529 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 DGKDQ16760 1214 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 SLC25A52Q3SY17 297 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 HACD2Q6Y1H2 254 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF513Q8N8E2 541 aaPredicted RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 BORCS5Q969J3 196 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 TCF12Q99081 682 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 NOL11Q9H8H0 719 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 SETD4Q9NVD3 440 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 CD300AQ9UGN4 299 aa15□□□□□ -0.01
CACNA1A-220ENST00000635988 CNOT6Q9ULM6 557 aaKnown RBP15□□□□□ -0.01
CACNA1A-220ENST00000635988 HBP1O60381 514 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 USP12O75317 370 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 CAPN15O75808 1086 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 LCP1P13796 627 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 FGFR3P22607 806 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 PTPN3P26045 913 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 SULT1E1P49888 294 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 CLCN3P51790 818 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 KCTD11Q693B1 232 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 REP15Q6BDI9 236 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 ITPRIPL1Q6GPH6 555 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 FAM45BPQ6NSW5 357 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 TTC33Q6PID6 262 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 CAMK1DQ8IU85 385 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 CCNYL1Q8N7R7 359 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 FAM45AQ8TCE6 357 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 GIPC3Q8TF64 312 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 KCTD4Q8WVF5 259 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 C12orf43Q96C57 262 aaKnown RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 MOCOSQ96EN8 888 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 HSFY1Q96LI6 401 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 SLC25A23Q9BV35 468 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 BRD8Q9H0E9 1235 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 MRM3Q9HC36 420 aaKnown RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 DUS2Q9NX74 493 aaKnown RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 SLC35E2BP0CK96 405 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF12P17014 697 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 CYP2B6P20813 491 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 GLRBP48167 497 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 NME5P56597 212 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 FASTKQ14296 549 aaKnown RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 PSMD5Q16401 504 aa14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 ZNF829Q3KNS6 432 aaPredicted RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 INTS11Q5TA45 600 aaKnown RBP14.99□□□□□ -0.01
CACNA1A-220ENST00000635988 KRT27Q7Z3Y8 459 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms