RNA–Protein interactions for RNA: ENST00000635857.1

LIN28B-202, Transcript of lin-28 homolog B, humanhuman

TSL 5

Gene LIN28B, Length 912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-202ENST00000635857 EP300Q09472 2414 aaPredicted RBP17.33■□□□□ 0.36
LIN28B-202ENST00000635857 GPR179Q6PRD1 2367 aa17.33■□□□□ 0.36
LIN28B-202ENST00000635857 PTPRZ1P23471 2315 aaPredicted RBP17.33■□□□□ 0.36
LIN28B-202ENST00000635857 FRYLO94915 3013 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3DA0A087WVF3 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3IA0A087WXS9 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3EA0A087X179 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3KA0A087X1G2 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 A0A1B0GTW7 788 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3FA6NER0 549 aaPredicted RBP17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3LB9A6J9 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 KRIT1O00522 736 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 SPOPO43791 374 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 LEFTY1O75610 366 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 MTA2O94776 668 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 NDUFA10O95299 355 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3HP0C7X1 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 SLC1A1P43005 524 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 ADPRHP54922 357 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 ARSIQ5FYB1 569 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 KIAA0895LQ68EN5 471 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3GQ6DHY5 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3CQ6IPX1 549 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TCEAL6Q6IPX3 200 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 NCEH1Q6PIU2 408 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 PLPP6Q8IY26 295 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TBC1D3Q8IZP1 549 aaPredicted RBP17.32■□□□□ 0.36
LIN28B-202ENST00000635857 BBS5Q8N3I7 341 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 CHST14Q8NCH0 376 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TCEAL3Q969E4 200 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 LRIG1Q96JA1 1093 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 BAG1Q99933 345 aaPredicted RBP17.32■□□□□ 0.36
LIN28B-202ENST00000635857 ZNF670Q9BS34 389 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 OSBPL1AQ9BXW6 950 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 SLC39A8Q9C0K1 460 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 KDM4CQ9H3R0 1056 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 TMEM74BQ9NUR3 256 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 SERGEFQ9UGK8 458 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 SARDHQ9UL12 918 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.32■□□□□ 0.36
LIN28B-202ENST00000635857 PCDHA13Q9Y5I0 950 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 ACTL7AQ9Y615 435 aa17.32■□□□□ 0.36
LIN28B-202ENST00000635857 SOWAHDA6NJG2 315 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 PATE3B3GLJ2 98 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 PRAMEF11O60813 436 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 LCA5LO95447 670 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 POP4O95707 220 aaKnown RBP17.31■□□□□ 0.36
LIN28B-202ENST00000635857 SYPP08247 313 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 SERPINF2P08697 491 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 AMPD1P23109 780 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 MAOBP27338 520 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 ID4P47928 161 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 CNTN1Q12860 1018 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 TEAD4Q15561 434 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 TXNRD3NBQ6F5E7 133 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 FBXL19Q6PCT2 694 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 SLC23A3Q6PIS1 610 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 ADAT2Q7Z6V5 191 aaKnown RBP17.31■□□□□ 0.36
LIN28B-202ENST00000635857 ZCCHC9Q8N567 271 aaKnown RBP17.31■□□□□ 0.36
LIN28B-202ENST00000635857 ATPAF2Q8N5M1 289 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 PAF1Q8N7H5 531 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 DNASE2BQ8WZ79 361 aa17.31■□□□□ 0.36
LIN28B-202ENST00000635857 CINPQ9BW66 212 aaPredicted RBP17.31■□□□□ 0.36
LIN28B-202ENST00000635857 EIF2B4Q9UI10 523 aaKnown RBP17.31■□□□□ 0.36
LIN28B-202ENST00000635857 EPN1Q9Y6I3 576 aaPredicted RBP17.31■□□□□ 0.36
LIN28B-202ENST00000635857 BCAT2O15382 392 aaPredicted RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 PLRG1O43660 514 aaKnown RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 PALMO75781 387 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 CD160O95971 181 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 CTSLP07711 333 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 ITGB7P26010 798 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 CD27P26842 260 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 DRD3P35462 400 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 NEK3P51956 506 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 NAP1L1P55209 391 aaKnown RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 GSDMDP57764 484 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 IL10RBQ08334 325 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 RFTN1Q14699 578 aaPredicted RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 GRM3Q14832 879 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 TCEAL1Q15170 157 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 RSPO4Q2I0M5 234 aaPredicted RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 CFAP58Q5T655 872 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 ERN2Q76MJ5 926 aaKnown RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 RHOT1Q8IXI2 618 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 NPWQ8N729 165 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 OR6K2Q8NGY2 324 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 SKA1Q96BD8 255 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 BIRC7Q96CA5 298 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 CALR3Q96L12 384 aaKnown RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 ZNF830Q96NB3 372 aaPredicted RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 PREBQ9HCU5 417 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 TMEM9BQ9NQ34 198 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 KLHL11Q9NVR0 708 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 HAUS2Q9NVX0 235 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 DDX56Q9NY93 547 aaKnown RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 IPO11Q9UI26 975 aaKnown RBP17.3■□□□□ 0.36
LIN28B-202ENST00000635857 WASF2Q9Y6W5 498 aa17.3■□□□□ 0.36
LIN28B-202ENST00000635857 GVINP1Q7Z2Y8 2422 aa17.29■□□□□ 0.36
LIN28B-202ENST00000635857 A0A0A6YYK5 440 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms