RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ADRB3P13945 408 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 DNA2P51530 1060 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 NFKB2Q00653 900 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 SGCGQ13326 291 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 C1orf61Q13536 156 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 SPIDRQ14159 915 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 ALFQ53S48 1182 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 TPRG1LQ5T0D9 272 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 DPY19L3Q6ZPD9 716 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 TFAP2DQ7Z6R9 452 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 JAMLQ86YT9 394 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 PASD1Q8IV76 773 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 EHBP1Q8NDI1 1231 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 ZNF606Q8WXB4 792 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 GLMNQ92990 594 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 FEM1CQ96JP0 617 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 ARHGAP9Q9BRR9 750 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 GDPD2Q9HCC8 539 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 APOBEC3BQ9UH17 382 aaKnown RBP14.99□□□□□ -0.01
PNKP-218ENST00000625299 SALL4Q9UJQ4 1053 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 BOD1L1Q8NFC6 3051 aa14.99□□□□□ -0.01
PNKP-218ENST00000625299 PTPN13Q12923 2485 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 CCDC187A0A096LP49 1063 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 A0A0D9SEW6 157 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 PSMA7O14818 248 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 PMM2O15305 246 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 SPINT1O43278 529 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 RPIAP49247 311 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 CLCN6P51797 869 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 ARL13BQ3SXY8 428 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 COBLL1Q53SF7 1204 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 PRRT3Q5FWE3 981 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 EFHC1Q5JVL4 640 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 ISM2Q6H9L7 571 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 FAM183BPQ6ZVS7 135 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 USP53Q70EK8 1073 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 CLEC14AQ86T13 490 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 SLC35F3Q8IY50 421 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 EXD3Q8N9H8 876 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 DCAF4L2Q8NA75 395 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 CEP63Q96MT8 703 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 CPXM1Q96SM3 734 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 CCDC3Q9BQI4 270 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 SPON2Q9BUD6 331 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 INTS2Q9H0H0 1204 aaKnown RBP14.98□□□□□ -0.01
PNKP-218ENST00000625299 TCEAL2Q9H3H9 227 aaPredicted RBP14.98□□□□□ -0.01
PNKP-218ENST00000625299 EPB41L5Q9HCM4 733 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 UBE2TQ9NPD8 197 aaPredicted RBP14.98□□□□□ -0.01
PNKP-218ENST00000625299 SPASTQ9UBP0 616 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 IL17BQ9UHF5 180 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 FADS3Q9Y5Q0 445 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 WASF2Q9Y6W5 498 aa14.98□□□□□ -0.01
PNKP-218ENST00000625299 IGLON5A6NGN9 336 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 M0QYT0 321 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 NEMP1O14524 444 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 TPP1O14773 563 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 P4HA2O15460 535 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 SMC2O95347 1197 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 GJB6O95452 261 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 GLI1P08151 1106 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 ITGA2BP08514 1039 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 ITGB7P26010 798 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 USP8P40818 1118 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 THOP1P52888 689 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 PDX1P52945 283 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 ADKP55263 362 aaKnown RBP14.97□□□□□ -0.01
PNKP-218ENST00000625299 EIF2B5Q13144 721 aaKnown RBP14.97□□□□□ -0.01
PNKP-218ENST00000625299 MTA1Q13330 715 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 STIM1Q13586 685 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 MEA1Q16626 185 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 KLHL10Q6JEL2 608 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 PARS2Q7L3T8 475 aaKnown RBP14.97□□□□□ -0.01
PNKP-218ENST00000625299 OR7D4Q8NG98 312 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 EXTL1Q92935 676 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 NAT6Q93015 286 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 SMARCE1Q969G3 411 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 PPP1R13BQ96KQ4 1090 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 GSDMAQ96QA5 445 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 SCAND2PQ9GZW5 306 aaPredicted RBP14.97□□□□□ -0.01
PNKP-218ENST00000625299 TKTL2Q9H0I9 626 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 ZDHHC6Q9H6R6 413 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 ASNSD1Q9NWL6 643 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 MPP6Q9NZW5 540 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 ATXN7L1Q9ULK2 861 aaPredicted RBP14.97□□□□□ -0.01
PNKP-218ENST00000625299 CNTN6Q9UQ52 1028 aa14.97□□□□□ -0.01
PNKP-218ENST00000625299 RIOK3O14730 519 aaKnown RBP14.96□□□□□ -0.01
PNKP-218ENST00000625299 EFSO43281 561 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 DAB1O75553 588 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 GCATO75600 419 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 ANXA6P08133 673 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 OR1E1P30953 314 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 L1CAMP32004 1257 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 MLLT3P42568 568 aaPredicted RBP14.96□□□□□ -0.01
PNKP-218ENST00000625299 CCNHP51946 323 aaPredicted RBP14.96□□□□□ -0.01
PNKP-218ENST00000625299 SRSF6Q13247 344 aaKnown RBP14.96□□□□□ -0.01
PNKP-218ENST00000625299 TCEA2Q15560 299 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 TGIF1Q15583 401 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 LINC00303Q3SY05 128 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 C5orf22Q49AR2 442 aa14.96□□□□□ -0.01
PNKP-218ENST00000625299 B3GNT8Q7Z7M8 397 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms