RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 URGCPQ8TCY9 931 aa15.39■□□□□ 0.05
PMS1-221ENST00000624204 UNC93B1Q9H1C4 597 aa15.39■□□□□ 0.05
PMS1-221ENST00000624204 CYP4F12Q9HCS2 524 aa15.39■□□□□ 0.05
PMS1-221ENST00000624204 SUN2Q9UH99 717 aa15.39■□□□□ 0.05
PMS1-221ENST00000624204 DYNC1LI2O43237 492 aaPredicted RBP15.38■□□□□ 0.05
PMS1-221ENST00000624204 ALDH1A2O94788 518 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 ENDOD1O94919 500 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 SLC7A2P52569 658 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 Q8N9G6 341 aaPredicted RBP15.38■□□□□ 0.05
PMS1-221ENST00000624204 PCYOX1LQ8NBM8 494 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 PRDM16Q9HAZ2 1276 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 SPAG4Q9NPE6 437 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 POLE4Q9NR33 117 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 HESX1Q9UBX0 185 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 HMGXB4Q9UGU5 601 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 POU2F3Q9UKI9 436 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 SLC27A5Q9Y2P5 690 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 LOXHD1Q8IVV2 1947 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 B4GAT1O43505 415 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 MICAL2O94851 1124 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 TCEA1P23193 301 aaKnown RBP15.38■□□□□ 0.05
PMS1-221ENST00000624204 PLK1P53350 603 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 DNASE1L3Q13609 305 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 RFTN1Q14699 578 aaPredicted RBP15.38■□□□□ 0.05
PMS1-221ENST00000624204 PGM5Q15124 567 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 NIPA1Q7RTP0 329 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 CCDC60Q8IWA6 550 aaPredicted RBP15.38■□□□□ 0.05
PMS1-221ENST00000624204 CADM3Q8N126 398 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 PNPLA1Q8N8W4 532 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 ACVR1CQ8NER5 493 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 NSMCE3Q96MG7 304 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 LGMNQ99538 433 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 FANCEQ9HB96 536 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 OXSMQ9NWU1 459 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 UBP1Q9NZI7 540 aa15.38■□□□□ 0.05
PMS1-221ENST00000624204 ATG7O95352 703 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 TPH1P17752 444 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 MLLT10P55197 1068 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 ABRAXAS1Q6UWZ7 409 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 DNAAF3Q8N9W5 541 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 ARNTL2Q8WYA1 636 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 SLC45A3Q96JT2 553 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 HEXIM2Q96MH2 286 aaKnown RBP15.37■□□□□ 0.05
PMS1-221ENST00000624204 TWNKQ96RR1 684 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 CPNE1Q99829 537 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 IDI2Q9BXS1 227 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 NACA2Q9H009 215 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 EHD1Q9H4M9 534 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 MRPL40Q9NQ50 206 aaKnown RBP15.37■□□□□ 0.05
PMS1-221ENST00000624204 TLK1Q9UKI8 766 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 ABCA3Q99758 1704 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 FAM155AB1AL88 458 aaPredicted RBP15.37■□□□□ 0.05
PMS1-221ENST00000624204 HSPA8P11142 646 aaKnown RBP15.37■□□□□ 0.05
PMS1-221ENST00000624204 MYF6P23409 242 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 GSSP48637 474 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 RAD23AP54725 363 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 STX5Q13190 355 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 CRY2Q49AN0 593 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 GRTP1Q5TC63 336 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 SAPCD2Q86UD0 394 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 ZNF354CQ86Y25 554 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 CPSF7Q8N684 471 aaKnown RBP15.37■□□□□ 0.05
PMS1-221ENST00000624204 TERB1Q8NA31 727 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 BEGAINQ9BUH8 593 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 GBA3Q9H227 469 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 MARCH7Q9H992 704 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 RIC8BQ9NVN3 520 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 OAZ3Q9UMX2 235 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 CPQQ9Y646 472 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 GCATO75600 419 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 CLPXO76031 633 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 OPRL1P41146 370 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 ASPAP45381 313 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 TPTEP56180 551 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 FASTKQ14296 549 aaKnown RBP15.37■□□□□ 0.05
PMS1-221ENST00000624204 ZNF460Q14592 562 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 HERC3Q15034 1050 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 SF3B4Q15427 424 aaKnown RBP eCLIP15.37■□□□□ 0.05
PMS1-221ENST00000624204 LIPMQ5VYY2 423 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 STEAP4Q687X5 459 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 REP15Q6BDI9 236 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 RNF19BQ6ZMZ0 732 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 RBBP8Q99708 897 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 PALMDQ9NP74 551 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 CACNA2D2Q9NY47 1150 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 SEPT3Q9UH03 358 aa15.37■□□□□ 0.05
PMS1-221ENST00000624204 NRAPQ86VF7 1730 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 MRASO14807 208 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 PFDN6O15212 129 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 GPC4O75487 556 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 S100BP04271 92 aaPredicted RBP15.36■□□□□ 0.05
PMS1-221ENST00000624204 IDUAP35475 653 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 RPS3AP61247 264 aaKnown RBP15.36■□□□□ 0.05
PMS1-221ENST00000624204 SEMA5AQ13591 1074 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 BOLA3Q53S33 107 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 EXOC8Q8IYI6 725 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 LHX5Q9H2C1 402 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 PKD2L2Q9NZM6 624 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 EP400Q96L91 3159 aa15.36■□□□□ 0.05
PMS1-221ENST00000624204 C2CD4BA6NLJ0 364 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms