RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 INCA1Q0VD86 236 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 TRIP10Q15642 601 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 LSM12Q3MHD2 195 aaKnown RBP12.65□□□□□ -0.38
LITAF-221ENST00000622633 MDH1BQ5I0G3 518 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 LGSNQ5TDP6 509 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 SLC9A4Q6AI14 798 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 SMYD5Q6GMV2 418 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 ACOT1Q86TX2 421 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 NUDCD3Q8IVD9 361 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 ARID3BQ8IVW6 561 aaPredicted RBP12.65□□□□□ -0.38
LITAF-221ENST00000622633 SHKBP1Q8TBC3 707 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 E2F7Q96AV8 911 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 ZNF641Q96N77 438 aaPredicted RBP12.65□□□□□ -0.38
LITAF-221ENST00000622633 COQ7Q99807 217 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 LPIN3Q9BQK8 851 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 TXNRD2Q9NNW7 524 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 FAM49BQ9NUQ9 324 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 PPARGC1AQ9UBK2 798 aaKnown RBP12.65□□□□□ -0.38
LITAF-221ENST00000622633 EBF1Q9UH73 591 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 AKT3Q9Y243 479 aa12.65□□□□□ -0.38
LITAF-221ENST00000622633 ANK1P16157 1881 aa12.65□□□□□ -0.39
LITAF-221ENST00000622633 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 SNTNA6NMZ2 147 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 SYCE1LA8MT33 242 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 F5H423 210 aaPredicted RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 KLF11O14901 512 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 CASQ2O14958 399 aaPredicted RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 TOP3BO95985 862 aaKnown RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 M6PRP20645 277 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 JAK1P23458 1154 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 IL32P24001 234 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 CCNCP24863 283 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 PRDX6P30041 224 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 SDC4P31431 198 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 ATXN1P54253 815 aaKnown RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 SLC10A2Q12908 348 aaPredicted RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 OXA1LQ15070 435 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 SMU1Q2TAY7 513 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 TRIM16LQ309B1 348 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 GALNT7Q86SF2 657 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.64□□□□□ -0.39
LITAF-221ENST00000622633 RBM15BQ8NDT2 890 aaKnown RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 TNIP2Q8NFZ5 429 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 GIMAP5Q96F15 307 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 FERD3LQ96RJ6 166 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 MRPL45Q9BRJ2 306 aaKnown RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 HERC2P3Q9BVR0 1158 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 FRMD8Q9BZ67 464 aaPredicted RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 RSPH9Q9H1X1 276 aaPredicted RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 CXCL16Q9H2A7 254 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 ABI2Q9NYB9 513 aaPredicted RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 CDH7Q9ULB5 785 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 HMX2A2RU54 273 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 IL1BP01584 269 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 ENO1P06733 434 aaKnown RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 POLR2CP19387 275 aaPredicted RBP12.64□□□□□ -0.39
LITAF-221ENST00000622633 CYP2F1P24903 491 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 BMXP51813 675 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 IRX4P78413 519 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 CTBSQ01459 385 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 NPTX1Q15818 432 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 NDUFAF2Q8N183 169 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 GALNT6Q8NCL4 622 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 KIF12Q96FN5 646 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 SIGLEC10Q96LC7 697 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 CNBD2Q96M20 576 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 THTPAQ9BU02 230 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 C20orf27Q9GZN8 174 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 HOXD1Q9GZZ0 328 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 PCDH12Q9NPG4 1184 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 GMIPQ9P107 970 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 ANGPTL3Q9Y5C1 460 aa12.64□□□□□ -0.39
LITAF-221ENST00000622633 H3BUI4 141 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 PAPSS1O43252 624 aaPredicted RBP12.63□□□□□ -0.39
LITAF-221ENST00000622633 ZNF254O75437 659 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 CRTAMO95727 393 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 SRGAP2BP0DMP2 458 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 CCDC130P13994 396 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 MAGEA6P43360 314 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 SLC26A2P50443 739 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 TPTEP56180 551 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 SLC6A3Q01959 620 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 GALNT1Q10472 559 aaPredicted RBP12.63□□□□□ -0.39
LITAF-221ENST00000622633 CBLBQ13191 982 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 NFE2Q16621 373 aaPredicted RBP12.63□□□□□ -0.39
LITAF-221ENST00000622633 FAM187BQ17R55 369 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 GRAMD1BQ3KR37 738 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 ATG16L1Q676U5 607 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 NXNQ6DKJ4 435 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 ZNF534Q76KX8 674 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 GPR180Q86V85 440 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 GSTCDQ8NEC7 633 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 ADAMTS16Q8TE57 1224 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 THAP11Q96EK4 314 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 ZNF486Q96H40 463 aaPredicted RBP12.63□□□□□ -0.39
LITAF-221ENST00000622633 C17orf80Q9BSJ5 609 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 KCNK4Q9NYG8 393 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 CFL2Q9Y281 166 aa12.63□□□□□ -0.39
LITAF-221ENST00000622633 PCM1Q15154 2024 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms