RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ADIGQ0VDE8 80 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 GLRA4Q5JXX5 417 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 FAM72AQ5TYM5 149 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 FAM72DQ6L9T8 149 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 FAM72BQ86X60 149 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 ERI1Q8IV48 349 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PCDH20Q8N6Y1 951 aaKnown RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 LRRC52Q8N7C0 313 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 GRIN3AQ8TCU5 1115 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 MAML3Q96JK9 1138 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PHF12Q96QT6 1004 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 DNAI2Q9GZS0 605 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 PCDHAC1Q9H158 963 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 DERAQ9Y315 318 aa19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.85■□□□□ 0.77
PDLIM3-212ENST00000620787 NUP205Q92621 2012 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 E7ENX8 843 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 CSPG5O95196 566 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 TXNP10599 105 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 ERCC2P18074 760 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 CDK9P50750 372 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 SLC12A1Q13621 1099 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 ZBTB6Q15916 424 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 SLC41A1Q8IVJ1 513 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 TRIML2Q8N7C3 387 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 HMGCLL1Q8TB92 370 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 SLCO4A1Q96BD0 722 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 APBA2Q99767 749 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 GJD2Q9UKL4 321 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 H3BNH8 94 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 M0QYT0 321 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 FGFR3P22607 806 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 GABRB3P28472 473 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 TKTP29401 623 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 RHDQ02161 417 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 SULT2A1Q06520 285 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 ZBTB17Q13105 803 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 FAM43BQ6ZT52 329 aaPredicted RBP19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 TOP1MTQ969P6 601 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 GPR78Q96P69 363 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 MPHOSPH6Q99547 160 aaKnown RBP19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 PDGFCQ9NRA1 345 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 PIGVQ9NUD9 493 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 SNTG2Q9NY99 539 aa19.84■□□□□ 0.77
PDLIM3-212ENST00000620787 TRIM24O15164 1050 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 PGK1P00558 417 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 CYP2C9P11712 490 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 NELFEP18615 380 aaKnown RBP19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 NFKB1P19838 968 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 NME3Q13232 169 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 LPIN1Q14693 890 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 DGKDQ16760 1214 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 PIGZQ86VD9 579 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 CCNYL1Q8N7R7 359 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 SNX27Q96L92 541 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 SLC29A1Q99808 456 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 UNC93B1Q9H1C4 597 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 PLEKHA5Q9HAU0 1116 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 OLAHQ9NV23 265 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 MYLKQ15746 1914 aa19.83■□□□□ 0.77
PDLIM3-212ENST00000620787 CCDC78A2IDD5 438 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 TRPC5OSA6NMA1 111 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 COL6A2P12110 1019 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 NOS2P35228 1153 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 GNL1P36915 607 aaPredicted RBP19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 PDAP1Q13442 181 aaKnown RBP19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 ZNF460Q14592 562 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 MTX3Q5HYI7 312 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 ZNF618Q5T7W0 954 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 SYPL2Q5VXT5 272 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 C9orf57Q5W0N0 161 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 NPWQ8N729 165 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 LIN28AQ9H9Z2 209 aaKnown RBP19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 RNF19AQ9NV58 838 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 NSMCE4AQ9NXX6 385 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 SARDHQ9UL12 918 aa19.83■□□□□ 0.76
PDLIM3-212ENST00000620787 TCRBV3S1A0A5B6 114 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 XPO1O14980 1071 aaKnown RBP19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 NPHS1O60500 1241 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 AHSGP02765 367 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 LRP8Q14114 963 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 HMBOX1Q6NT76 420 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 MYO1HQ8N1T3 1032 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 RNF169Q8NCN4 708 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 LPGAT1Q92604 370 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 NXNL1Q96CM4 212 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 UHRF1Q96T88 793 aaPredicted RBP19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 TMEM79Q9BSE2 394 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 TRPV6Q9H1D0 765 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 CAAP1Q9H8G2 361 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 ANLNQ9NQW6 1124 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 MYRFQ9Y2G1 1151 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 HEMK1Q9Y5R4 338 aaPredicted RBP19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 GJA3Q9Y6H8 435 aa19.82■□□□□ 0.76
PDLIM3-212ENST00000620787 FBP2O00757 339 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 ZNF189O75820 626 aaPredicted RBP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 CNMDO75829 334 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 YBX3P16989 372 aaKnown RBP eCLIP19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 DNAJB1P25685 340 aa19.81■□□□□ 0.76
PDLIM3-212ENST00000620787 NDST2P52849 883 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms