RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 CPNE1Q99829 537 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 PORCNQ9H237 461 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 MAGEE1Q9HCI5 957 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 ARMC1Q9NVT9 282 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 UBIAD1Q9Y5Z9 338 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 TCAF2A6NFQ2 919 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 TNPO2O14787 897 aaKnown RBP10.97□□□□□ -0.65
UPF3A-212ENST00000619079 DYNC1LI2O43237 492 aaPredicted RBP10.97□□□□□ -0.65
UPF3A-212ENST00000619079 FKTNO75072 461 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 DGAT1O75907 488 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 SLC25A27O95847 323 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 MPOP05164 745 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 CD247P20963 164 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 HNRNPFP52597 415 aaKnown RBP10.97□□□□□ -0.65
UPF3A-212ENST00000619079 WNT7BP56706 349 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 MERTKQ12866 999 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 SEMA5AQ13591 1074 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 TUBA3CQ13748 450 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 ZNF846Q147U1 533 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 STILQ15468 1287 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 TAF5Q15542 800 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 SLC9A4Q6AI14 798 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 DNAJC14Q6Y2X3 702 aaPredicted RBP10.97□□□□□ -0.65
UPF3A-212ENST00000619079 ARMCX6Q7L4S7 300 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 ERMP1Q7Z2K6 904 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 EMC1Q8N766 993 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 RAB2BQ8WUD1 216 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 SEPT8Q92599 483 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 CEP170P1Q96L14 293 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 CTRCQ99895 268 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 SPAG4Q9NPE6 437 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 SNX15Q9NRS6 342 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 RNF146Q9NTX7 359 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 SMOXQ9NWM0 555 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 RIPK3Q9Y572 518 aa10.97□□□□□ -0.65
UPF3A-212ENST00000619079 CENPFP49454 3210 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 ARID2Q68CP9 1835 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 G3V2L1 256 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 PIK3R2O00459 728 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 PRPSAP2O60256 369 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 ZNF143P52747 638 aaPredicted RBP10.96□□□□□ -0.65
UPF3A-212ENST00000619079 FCGRTP55899 365 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 PRKCQQ04759 706 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 PPP6R3Q5H9R7 873 aaPredicted RBP10.96□□□□□ -0.65
UPF3A-212ENST00000619079 PPM1JQ5JR12 505 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 NXNQ6DKJ4 435 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 GALNT18Q6P9A2 607 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 NAPRTQ6XQN6 538 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 IGFN1Q86VF2 1251 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 XYLT1Q86Y38 959 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 RIOX2Q8IUF8 465 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 CD99L2Q8TCZ2 262 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 TANKQ92844 425 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 SLCO4A1Q96BD0 722 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 PGBD4Q96DM1 585 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 CNPY3Q9BT09 278 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 C9orf16Q9BUW7 83 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 HMG20AQ9NP66 347 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 NXF1Q9UBU9 619 aaKnown RBP10.96□□□□□ -0.65
UPF3A-212ENST00000619079 SARDHQ9UL12 918 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 ERVK-11Q9UQG0 969 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 PCDHGA7Q9Y5G6 932 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 CPQQ9Y646 472 aa10.96□□□□□ -0.65
UPF3A-212ENST00000619079 C1orf232A0A0U1RR37 186 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 WDR27A2RRH5 827 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TMX2-CTNND1H3BSU7 103 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 SOCS2O14508 198 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TRIM24O15164 1050 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 CPNE6O95741 557 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 PIGRP01833 764 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 AMHP03971 560 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 ZNF182P17025 639 aaPredicted RBP10.96□□□□□ -0.66
UPF3A-212ENST00000619079 SPRP35270 261 aaPredicted RBP10.96□□□□□ -0.66
UPF3A-212ENST00000619079 LBX1P52954 281 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 MPP1Q00013 466 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 OCA2Q04671 838 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 SLC36A3Q495N2 470 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 SAMD4BQ5PRF9 694 aaKnown RBP10.96□□□□□ -0.66
UPF3A-212ENST00000619079 HMBOX1Q6NT76 420 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 DENND1BQ6P3S1 775 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 LINC00299Q6ZSB3 139 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 KCTD8Q6ZWB6 473 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TAS1R3Q7RTX0 852 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TRMT1LQ7Z2T5 733 aaKnown RBP10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TNS4Q8IZW8 715 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TTC30BQ8N4P2 665 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 FAM156AQ8NDB6 213 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 AGR3Q8TD06 166 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TFAP2BQ92481 460 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 LPGAT1Q92604 370 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 DHRS1Q96LJ7 313 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 NPAS2Q99743 824 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 TRIM15Q9C019 465 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 ARHGAP39Q9C0H5 1083 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 WDR12Q9GZL7 423 aaKnown RBP10.96□□□□□ -0.66
UPF3A-212ENST00000619079 IL22Q9GZX6 179 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 MROH8Q9H579 483 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 ACAD9Q9H845 621 aa10.96□□□□□ -0.66
UPF3A-212ENST00000619079 GPN2Q9H9Y4 310 aaPredicted RBP10.96□□□□□ -0.66
UPF3A-212ENST00000619079 OXSMQ9NWU1 459 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms