RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 PSMD3O43242 534 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 CACNG3O60359 315 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 SNX3O60493 162 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 CLDN11O75508 207 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 RFPL2O75678 378 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 FGF19O95750 216 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 OLFM2O95897 454 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 RHOCP08134 193 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 ADRA1DP25100 572 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 GBP2P32456 591 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 CD86P42081 329 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 CLCN4P51793 760 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 DSC2Q02487 901 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 LBRQ14739 615 aaKnown RBP12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 RASA2Q15283 850 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 STEAP4Q687X5 459 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 LVRNQ6Q4G3 990 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 CCDC121Q6ZUS5 278 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 SPATS2Q86XZ4 545 aaKnown RBP12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 CCNJLQ8IV13 435 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 MICALL1Q8N3F8 863 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 NAT9Q9BTE0 207 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 MAN1C1Q9NR34 630 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 ACTL7AQ9Y615 435 aa12.9□□□□□ -0.34
TNFAIP3-209ENST00000619035 A0A1B0GVM2 712 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 TCAF2A6NFQ2 919 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 FAM159BA6NKW6 160 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 H3BNC9 293 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 GRM6O15303 877 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 PRAMEF11O60813 436 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 PYGBP11216 843 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 IL9RQ01113 521 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZNF235Q14590 738 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 C9orf50Q5SZB4 431 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 TCP10LQ8TDR4 215 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 SGSM3Q96HU1 749 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 LRRC3Q9BY71 257 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 SMG9Q9H0W8 520 aaKnown RBP12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 CHRAC1Q9NRG0 131 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 SENP1Q9P0U3 644 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 STOML2Q9UJZ1 356 aa12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 SMG5Q9UPR3 1016 aaKnown RBP12.9□□□□□ -0.35
TNFAIP3-209ENST00000619035 CHD7Q9P2D1 2997 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 SOBPA7XYQ1 873 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 AP3B1O00203 1094 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 TBL1XO60907 577 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 MT-ND3P03897 115 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 CA3P07451 260 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 ERVK-10P10266 1014 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 GLDCP23378 1020 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 CDC25CP30307 473 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 NPY2RP49146 381 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 POU6F1Q14863 301 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 RASSF3Q86WH2 238 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 CARNMT1Q8N4J0 409 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 MFSD3Q96ES6 412 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 FCRL3Q96P31 734 aaPredicted RBP12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 IL22Q9GZX6 179 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 NSRP1Q9H0G5 558 aaKnown RBP12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 MUC3BQ9H195 1237 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC25A51Q9H1U9 297 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 MAGEH1Q9H213 219 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 ABCF3Q9NUQ8 709 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 MOCS1Q9NZB8 636 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 CFAP97Q9P2B7 532 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 DPP7Q9UHL4 492 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 GGA2Q9UJY4 613 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 OBSL1O75147 1896 aa12.89□□□□□ -0.35
TNFAIP3-209ENST00000619035 TRAV19A0A0A6YYK7 116 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 TRIM49D1C9J1S8 452 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 H0Y626 953 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CBX4O00257 560 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 GJB3O75712 270 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 F7P08709 466 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 HOXD9P28356 352 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 HOXA9P31269 272 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CHRNA4P43681 627 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 OXCT1P55809 520 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 WNT3AP56704 352 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 NIPAL4Q0D2K0 466 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 SPANXN3Q5MJ09 141 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 TTC39BQ5VTQ0 682 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 HHATQ5VTY9 493 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 RNF219Q5W0B1 726 aaPredicted RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 KLHDC8BQ8IXV7 354 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 SLC25A41Q8N5S1 370 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 BANPQ8N9N5 519 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CCT6BQ92526 530 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 CDKL2Q92772 493 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 MRGPRX2Q96LB1 330 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 ATP13A1Q9HD20 1204 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 ZFATQ9P243 1243 aa12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 LSM7Q9UK45 103 aaKnown RBP12.88□□□□□ -0.35
TNFAIP3-209ENST00000619035 SH3BP1Q9Y3L3 701 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms