RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 RNASEH2BQ5TBB1 312 aaKnown RBP12.27□□□□□ -0.44
SRRT-216ENST00000618262 PAQR9Q6ZVX9 377 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 Q7L0L9 218 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 CPNE8Q86YQ8 564 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 OR6C4Q8NGE1 309 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 CPXM1Q96SM3 734 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 CLSTN3Q9BQT9 956 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 PRDM12Q9H4Q4 367 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 VRTNQ9H8Y1 702 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 VPS37BQ9H9H4 285 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 OSGEPQ9NPF4 335 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 NAGPAQ9UK23 515 aa12.27□□□□□ -0.44
SRRT-216ENST00000618262 BRWD1Q9NSI6 2320 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.27□□□□□ -0.45
SRRT-216ENST00000618262 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.27□□□□□ -0.45
SRRT-216ENST00000618262 O00370 1275 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 HPGDP15428 266 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 TMEM11P17152 192 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 IGFBP4P22692 258 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 NUMBP49757 651 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 NAA20P61599 178 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 CAMK1Q14012 370 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 ENOSF1Q7L5Y1 443 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 AKAP14Q86UN6 197 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 UBR7Q8N806 425 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 BRD9Q9H8M2 597 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 SENP1Q9P0U3 644 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 FNIP2Q9P278 1114 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 FBXO10Q9UK96 956 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 PCDHB8Q9UN66 801 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 GABRDO14764 452 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 GRK2P25098 689 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 MAGEA1P43355 309 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 GLUD2P49448 558 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 RPP38P78345 283 aaKnown RBP12.27□□□□□ -0.45
SRRT-216ENST00000618262 CENPCQ03188 943 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 INCA1Q0VD86 236 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 GPM6BQ13491 265 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 SPA17Q15506 151 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 FAM122CQ6P4D5 195 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 ADGRD2Q7Z7M1 963 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 EMC1Q8N766 993 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 FAM149B1Q96BN6 582 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 ARHGEF26Q96DR7 871 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 PSMB7Q99436 277 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 WNT5BQ9H1J7 359 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 CYP3A43Q9HB55 503 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 CRLF2Q9HC73 371 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 AAASQ9NRG9 546 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 MRPL17Q9NRX2 175 aaKnown RBP12.27□□□□□ -0.45
SRRT-216ENST00000618262 MSRAQ9UJ68 235 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 SALL4Q9UJQ4 1053 aa12.27□□□□□ -0.45
SRRT-216ENST00000618262 RBMX2Q9Y388 322 aaKnown RBP12.27□□□□□ -0.45
SRRT-216ENST00000618262 MYH10P35580 1976 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 E5RJQ4 531 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 SOX1O00570 391 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 INPPL1O15357 1258 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 CNOT3O75175 753 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 RFPL2O75678 378 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 KRT16P08779 473 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 PABPC4LP0CB38 370 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 HOXB1P14653 301 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 TCEA1P23193 301 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 KLRC2P26717 231 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 HSPA9P38646 679 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 PTPN9P43378 593 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 LHX1P48742 406 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 PGFP49763 221 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 ZNF135P52742 658 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 GPR85P60893 370 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 MEA1Q16626 185 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 GSTA3Q16772 222 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 INTS6LQ5JSJ4 861 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 MARK2Q7KZI7 788 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 C12orf76Q8N812 135 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 OLIG1Q8TAK6 271 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 KLHL29Q96CT2 875 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 SLC47A1Q96FL8 570 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 TNIP3Q96KP6 325 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 MRPL1Q9BYD6 325 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 EHD1Q9H4M9 534 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 NKX1-2Q9UD57 310 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 TRDMT1O14717 391 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 SOD2P04179 222 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 POLR2CP19387 275 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 FGFR3P22607 806 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 WARSP23381 471 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 CSTF2P33240 577 aaKnown RBP eCLIP12.26□□□□□ -0.45
SRRT-216ENST00000618262 NSFP46459 744 aaKnown RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 MAPKAPK2P49137 400 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 IST1P53990 364 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 NCALDP61601 193 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 CCDC85BQ15834 202 aaPredicted RBP12.26□□□□□ -0.45
SRRT-216ENST00000618262 BORAQ6PGQ7 559 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 GALNT13Q8IUC8 556 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 SPPL3Q8TCT6 385 aa12.26□□□□□ -0.45
SRRT-216ENST00000618262 TIFAQ96CG3 184 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms