RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 LZICQ8WZA0 190 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 CSPG4P5Q96PW8 444 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 STN1Q9H668 368 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 FBRSL1Q9HCM7 1045 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 SUN2Q9UH99 717 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 ITM2BQ9Y287 266 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 SLX4Q8IY92 1834 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 H3BNH8 94 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 CES1P23141 567 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 NR1D2Q14995 579 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 PDK2Q15119 407 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 FUT11Q495W5 492 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 AARS2Q5JTZ9 985 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 TBCELQ5QJ74 424 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 CHERPQ8IWX8 916 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 Q8N9G6 341 aaPredicted RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 VPS39Q96JC1 886 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 MRPL46Q9H2W6 279 aaKnown RBP13.35□□□□□ -0.27
MSH6-214ENST00000616033 HESX1Q9UBX0 185 aa13.35□□□□□ -0.27
MSH6-214ENST00000616033 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 MATN2O00339 956 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 VWA5AO00534 786 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 MSCO60682 206 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 NOL3O60936 208 aaKnown RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 BCAS2O75934 225 aaPredicted RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 GLDCP23378 1020 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 RELAQ04206 551 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 SULT2A1Q06520 285 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 PMS2P3Q13401 168 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CYP2A13Q16696 494 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 LY6KQ17RY6 165 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 FBXO48Q5FWF7 155 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CHSY3Q70JA7 882 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 GPATCH1Q9BRR8 931 aaKnown RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 FRMD8Q9BZ67 464 aaPredicted RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 MINDY3Q9H8M7 445 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 PNPLA3Q9NST1 481 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 UTP6Q9NYH9 597 aaKnown RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 BFARQ9NZS9 450 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 SPO11Q9Y5K1 396 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 ADGRA2Q96PE1 1338 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 PRSS51A0A1B0GVH4 220 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 TRIM38O00635 465 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 GRID2O43424 1007 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CNTFP26441 200 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CDH5P33151 784 aaPredicted RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 HSPA13P48723 471 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 NIPAL4Q0D2K0 466 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 FASTKQ14296 549 aaKnown RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 KIZQ2M2Z5 673 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CCDC153Q494R4 210 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CENPSQ8N2Z9 138 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.34□□□□□ -0.27
MSH6-214ENST00000616033 MAGEE2Q8TD90 523 aaPredicted RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 NXNL1Q96CM4 212 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 GPRASP2Q96D09 838 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 LRCH3Q96II8 777 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 PPP1R10Q96QC0 940 aaKnown RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 SEPHS2Q99611 448 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 LHX5Q9H2C1 402 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 ADNPQ9H2P0 1102 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 NRBP2Q9NSY0 501 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 VANGL2Q9ULK5 521 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 CNOT6Q9ULM6 557 aaKnown RBP13.34□□□□□ -0.27
MSH6-214ENST00000616033 STYXL1Q9Y6J8 313 aa13.34□□□□□ -0.27
MSH6-214ENST00000616033 A0A0A0MRY4 1105 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 HEATR9A2RTY3 570 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 WDR46O15213 610 aaKnown RBP13.33□□□□□ -0.27
MSH6-214ENST00000616033 FUCA1P04066 466 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 YWHAQP27348 245 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 ARL2P36404 184 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 NKX2-5P52952 324 aaPredicted RBP13.33□□□□□ -0.27
MSH6-214ENST00000616033 BFSP2Q13515 415 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 TRIM25Q14258 630 aaKnown RBP13.33□□□□□ -0.27
MSH6-214ENST00000616033 TGFBIQ15582 683 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 MAPK11Q15759 364 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 GALNT18Q6P9A2 607 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 FAM35AQ86V20 835 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 KCNMB4Q86W47 210 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 DQX1Q8TE96 717 aaKnown RBP13.33□□□□□ -0.27
MSH6-214ENST00000616033 PLEKHA8Q96JA3 519 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 COX4I2Q96KJ9 171 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 SPATA13Q96N96 652 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 MTMR10Q9NXD2 777 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 CPSF3Q9UKF6 684 aaKnown RBP13.33□□□□□ -0.27
MSH6-214ENST00000616033 RAP2CQ9Y3L5 183 aa13.33□□□□□ -0.27
MSH6-214ENST00000616033 TCAF2A6NFQ2 919 aa13.33□□□□□ -0.28
MSH6-214ENST00000616033 KDM1AO60341 852 aa13.33□□□□□ -0.28
MSH6-214ENST00000616033 ADAM23O75077 832 aa13.33□□□□□ -0.28
MSH6-214ENST00000616033 ATP5BP06576 529 aaKnown RBP13.33□□□□□ -0.28
MSH6-214ENST00000616033 CHRM3P20309 590 aa13.33□□□□□ -0.28
MSH6-214ENST00000616033 HMOX2P30519 316 aa13.33□□□□□ -0.28
MSH6-214ENST00000616033 POU6F1Q14863 301 aa13.33□□□□□ -0.28
MSH6-214ENST00000616033 DENND6AQ8IWF6 608 aa13.33□□□□□ -0.28
MSH6-214ENST00000616033 ZC3H7AQ8IWR0 971 aaKnown RBP13.33□□□□□ -0.28
MSH6-214ENST00000616033 FSTL5Q8N475 847 aaPredicted RBP13.33□□□□□ -0.28
MSH6-214ENST00000616033 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
MSH6-214ENST00000616033 ZNF280CQ8ND82 737 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms