RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 PLD6Q8N2A8 252 aaKnown RBP14.93□□□□□ -0.02
CDH1-213ENST00000612417 DNAAF3Q8N9W5 541 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 CMTM5Q96DZ9 223 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 PKMYT1Q99640 499 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 MRPL9Q9BYD2 267 aaKnown RBP14.93□□□□□ -0.02
CDH1-213ENST00000612417 ZNF358Q9NW07 568 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 PTPRDP23468 1912 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 A0A096LPK6 155 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 DPPA5A6NC42 116 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 ANKRD33BA6NCL7 494 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 MEI4A8MW99 385 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 NT5C1B-RDH14C9J2C7 533 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 OAZ2O95190 189 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 NCAM1P13591 858 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 GRIK1P39086 918 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 SLC11A1P49279 550 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 ZNF33AQ06730 810 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 ZBTB17Q13105 803 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 MPP3Q13368 585 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 IKBKEQ14164 716 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 PGM2L1Q6PCE3 622 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 BHLHA9Q7RTU4 235 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 KCNMB4Q86W47 210 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 KBTBD2Q8IY47 623 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 DCP1BQ8IZD4 617 aaKnown RBP14.93□□□□□ -0.02
CDH1-213ENST00000612417 ADAM32Q8TC27 787 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 ACTRT2Q8TDY3 377 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 PAWRQ96IZ0 340 aaKnown RBP14.93□□□□□ -0.02
CDH1-213ENST00000612417 AGAP2Q99490 1192 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 EPAS1Q99814 870 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 CDH19Q9H159 772 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 CSNK1G1Q9HCP0 422 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 DDIT4Q9NX09 232 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 NDE1Q9NXR1 346 aa14.93□□□□□ -0.02
CDH1-213ENST00000612417 ABI2Q9NYB9 513 aaPredicted RBP14.93□□□□□ -0.02
CDH1-213ENST00000612417 VWA8A3KMH1 1905 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 HHLA1C9JL84 531 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 SYN3O14994 580 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 SKAP2O75563 359 aaPredicted RBP14.92□□□□□ -0.02
CDH1-213ENST00000612417 PBX3P40426 434 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 CXCR3P49682 368 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 NUMBP49757 651 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 GSTA3Q16772 222 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 VARS2Q5ST30 1063 aaKnown RBP14.92□□□□□ -0.02
CDH1-213ENST00000612417 METTL21CQ5VZV1 264 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 EPGNQ6UW88 154 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.92□□□□□ -0.023e-8■□□□□ 9.9
CDH1-213ENST00000612417 LCA5Q86VQ0 697 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 SCN4BQ8IWT1 228 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 ZSCAN18Q8TBC5 510 aaPredicted RBP14.92□□□□□ -0.02
CDH1-213ENST00000612417 SREK1Q8WXA9 508 aaKnown RBP14.92□□□□□ -0.02
CDH1-213ENST00000612417 MFSD3Q96ES6 412 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 B3GALT6Q96L58 329 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 TEKT5Q96M29 485 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 PGLYRP2Q96PD5 576 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 NSMCE4AQ9NXX6 385 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 MID2Q9UJV3 735 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 TBX21Q9UL17 535 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 NLRC5Q86WI3 1866 aa14.92□□□□□ -0.02
CDH1-213ENST00000612417 PATJQ8NI35 1801 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 CACNG3O60359 315 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 C2P06681 752 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 APOA4P06727 396 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 CLTBP09497 229 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 NFKB1P19838 968 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 GMPRP36959 345 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 GJA8P48165 433 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 SLC25A3Q00325 362 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 SMAD1Q15797 465 aaKnown RBP14.91□□□□□ -0.02
CDH1-213ENST00000612417 CTXN3Q4LDR2 81 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 HSP90AA5PQ58FG0 334 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 FSCBQ5H9T9 825 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 CERCAMQ5T4B2 595 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 C1orf53Q5VUE5 145 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 PM20D1Q6GTS8 502 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 TNS4Q8IZW8 715 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 RDH11Q8TC12 318 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 STON2Q8WXE9 905 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 LBHD1Q9BQE6 289 aaPredicted RBP14.91□□□□□ -0.02
CDH1-213ENST00000612417 GPR62Q9BZJ7 368 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 VCXQ9H320 206 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 C11orf49Q9H6J7 331 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 TRIM13O60858 407 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 CRABP2P29373 138 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 HK2P52789 917 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 ARPP19P56211 112 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 CDH17Q12864 832 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 NAPEPLDQ6IQ20 393 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 TMEM154Q6P9G4 183 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 NAPRTQ6XQN6 538 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 POU5F2Q8N7G0 328 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 ZNF781Q8N8C0 355 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 UCMAQ8WVF2 138 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 IRGQQ8WZA9 623 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 JADE3Q92613 823 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 GATA6Q92908 595 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 AZIN2Q96A70 460 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 VPS39Q96JC1 886 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 GPR22Q99680 433 aa14.91□□□□□ -0.02
CDH1-213ENST00000612417 ZCWPW1Q9H0M4 648 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms