RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SERPINB11Q96P15 392 aa8.8□□□□□ -1
LIG4-204ENST00000611712 NDFIP2Q9NV92 336 aa8.8□□□□□ -1
LIG4-204ENST00000611712 MPP6Q9NZW5 540 aa8.8□□□□□ -1
LIG4-204ENST00000611712 PSMD12O00232 456 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 PGM3O95394 542 aa8.8□□□□□ -1
LIG4-204ENST00000611712 STAU1O95793 577 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 FGFR1P11362 822 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ETV4P43268 484 aa8.8□□□□□ -1
LIG4-204ENST00000611712 KCNK10P57789 538 aa8.8□□□□□ -1
LIG4-204ENST00000611712 PDK3Q15120 406 aa8.8□□□□□ -1
LIG4-204ENST00000611712 C6orf10Q5SRN2 563 aa8.8□□□□□ -1
LIG4-204ENST00000611712 METTL21CQ5VZV1 264 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ZBTB49Q6ZSB9 765 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CLEC20AQ6ZU45 233 aa8.8□□□□□ -1
LIG4-204ENST00000611712 RDH11Q8TC12 318 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CYGBQ8WWM9 190 aa8.8□□□□□ -1
LIG4-204ENST00000611712 NCLNQ969V3 563 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ULK4Q96C45 1275 aa8.8□□□□□ -1
LIG4-204ENST00000611712 NXNL1Q96CM4 212 aa8.8□□□□□ -1
LIG4-204ENST00000611712 RTKNQ9BST9 563 aa8.8□□□□□ -1
LIG4-204ENST00000611712 MTG1Q9BT17 334 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 SEMA6AQ9H2E6 1030 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ALG9Q9H6U8 611 aa8.8□□□□□ -1
LIG4-204ENST00000611712 GLOD4Q9HC38 313 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CD274Q9NZQ7 290 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CROTQ9UKG9 612 aa8.8□□□□□ -1
LIG4-204ENST00000611712 RNF112Q9ULX5 631 aa8.8□□□□□ -1
LIG4-204ENST00000611712 A0A087X1B8 175 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ATP6AP2A0A1C7CYW4 349 aa8.8□□□□□ -1
LIG4-204ENST00000611712 FGF10O15520 208 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 MSI1O43347 362 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 RAMP2O60895 175 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ATP6AP2O75787 350 aa8.8□□□□□ -1
LIG4-204ENST00000611712 MYCP01106 439 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 LYNP07948 512 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CD86P42081 329 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CLCNKBP51801 687 aa8.8□□□□□ -1
LIG4-204ENST00000611712 CCNHP51946 323 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 MRPS6P82932 125 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 MPP1Q00013 466 aa8.8□□□□□ -1
LIG4-204ENST00000611712 IRF9Q00978 393 aa8.8□□□□□ -1
LIG4-204ENST00000611712 NFE2Q16621 373 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 SLC39A12Q504Y0 691 aa8.8□□□□□ -1
LIG4-204ENST00000611712 POTEHQ6S545 545 aa8.8□□□□□ -1
LIG4-204ENST00000611712 PTCD3Q96EY7 689 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 SLC9A7Q96T83 725 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ADAM2Q99965 735 aa8.8□□□□□ -1
LIG4-204ENST00000611712 DHRS4Q9BTZ2 278 aa8.8□□□□□ -1
LIG4-204ENST00000611712 FBXW11Q9UKB1 542 aa8.8□□□□□ -1
LIG4-204ENST00000611712 ABT1Q9ULW3 272 aaKnown RBP8.8□□□□□ -1
LIG4-204ENST00000611712 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.8□□□□□ -1
LIG4-204ENST00000611712 CAPN8A6NHC0 703 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CHRNGP07510 517 aa8.79□□□□□ -1
LIG4-204ENST00000611712 LTA4HP09960 611 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 AKR1A1P14550 325 aa8.79□□□□□ -1
LIG4-204ENST00000611712 WARSP23381 471 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 PSEN1P49768 467 aa8.79□□□□□ -1
LIG4-204ENST00000611712 WNT3AP56704 352 aa8.79□□□□□ -1
LIG4-204ENST00000611712 TWF1Q12792 350 aa8.79□□□□□ -1
LIG4-204ENST00000611712 NRF1Q16656 503 aa8.79□□□□□ -1
LIG4-204ENST00000611712 IMPG1Q17R60 797 aa8.79□□□□□ -1
LIG4-204ENST00000611712 FUT11Q495W5 492 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ZRANB3Q5FWF4 1079 aa8.79□□□□□ -1
LIG4-204ENST00000611712 DCLRE1AQ6PJP8 1040 aa8.79□□□□□ -1
LIG4-204ENST00000611712 DQX1Q8TE96 717 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 DIS3LQ8TF46 1054 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 GIPC2Q8TF65 315 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PRPF18Q99633 342 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 MRPL57Q9BQC6 102 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 PPM1HQ9ULR3 514 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PRPF19Q9UMS4 504 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 POMPQ9Y244 141 aa8.79□□□□□ -1
LIG4-204ENST00000611712 LTBP3Q9NS15 1303 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PAGE1O75459 146 aa8.79□□□□□ -1
LIG4-204ENST00000611712 E2F6O75461 281 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ALDOAP04075 364 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 FAM58BPP0C7Q3 252 aa8.79□□□□□ -1
LIG4-204ENST00000611712 GSTT1P30711 240 aa8.79□□□□□ -1
LIG4-204ENST00000611712 MAP2K5Q13163 448 aa8.79□□□□□ -1
LIG4-204ENST00000611712 LBRQ14739 615 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 CTXN3Q4LDR2 81 aa8.79□□□□□ -1
LIG4-204ENST00000611712 MBLAC2Q68D91 279 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ESRP1Q6NXG1 681 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 TIFABQ6ZNK6 161 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PQLC1Q8N2U9 271 aa8.79□□□□□ -1
LIG4-204ENST00000611712 LRRC43Q8N309 656 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ZC3H15Q8WU90 426 aaKnown RBP8.79□□□□□ -1
LIG4-204ENST00000611712 TEKT5Q96M29 485 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PANX3Q96QZ0 392 aa8.79□□□□□ -1
LIG4-204ENST00000611712 NPAS2Q99743 824 aa8.79□□□□□ -1
LIG4-204ENST00000611712 C16orf70Q9BSU1 422 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ZFYVE28Q9HCC9 887 aa8.79□□□□□ -1
LIG4-204ENST00000611712 MID1IP1Q9NPA3 183 aa8.79□□□□□ -1
LIG4-204ENST00000611712 EURLQ9NYK6 297 aa8.79□□□□□ -1
LIG4-204ENST00000611712 ZBTB42B2RXF5 422 aa8.79□□□□□ -1
LIG4-204ENST00000611712 SH3BP5O60239 455 aa8.79□□□□□ -1
LIG4-204ENST00000611712 SOAT2O75908 522 aa8.79□□□□□ -1
LIG4-204ENST00000611712 CSPG5O95196 566 aa8.79□□□□□ -1
LIG4-204ENST00000611712 PGK1P00558 417 aa8.79□□□□□ -1
LIG4-204ENST00000611712 DHRS4L1P0CG22 281 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms